Id Trinity | FTRINITY_DN56617_c1_g2_i8 |
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Name Transcript | Ll_transcript_84615 |
Sequence | CAAAAGCCTCACAATTCCAAGGTCTGTGAATTTAAACAAGAACTATTAAAGCTATCATTTTACAATTGATGTCTCAAGATTTTGAGTTCAAATGTGGTGT CAAATTCATTCTTGTAATTGCTCACTTAACTGGTCAATAAACAAGATTAACTCATTCTCCCATTTTCAATACTTGCATAAGGTTCCATCATGAAATTCTA ATGTTAGGATGCATGATCCTTAAGATGCTGTTTGGTTTGTGTTGGATAAAATAGTTAATTTTAAGAATGAATGTTTTTTATTTATGTTTGTTTAGGGTGT AGCAGAAAGTGTTAACAAAGAGAAGAAGATCAAAGTGAGTGGTGATGAAGAGGAATCCAAGATGGCCGAGCAAACCAGTAAAAAGAATACAAAGGCAAAC ACAAGTAAGGCCAACAAGGAAACTTGTGGTGAAAGTTCCAAGGAGAATTCAAAAGACTCTGAGGTTCAAAATCCAAAGCCTGATTACATTCATGTCCGGG CACGTCGTGGCCAAGCCACCGATAGTCATAGCTTAGCTGAAAGAGTTAGAAGGGAAAAAATTAGTGGGAGAATGAAGTATTTGCAAGATTTAGTACCAGG TTGCAACAAAATCACAGGAAAAGCTGGAATGCTTGATGAAATCATTAACTATGTTCAGTCCCTTCAACGGCAAGTTGAGTTCTTGTCAATGAAATTAGCT GCTGTGAACCCAAGACTTGACTTGACCATCGATGATTTGTTTGTCAAAGAGGTATTCCCGGCTTGTTCTCCAAGATTTCCAAGCACAGGGATGCAATCAG ACATTACTACTAACCCTGCGTATCTTCAATTCAGTCCAGCACAACTTGTTTCATATTTTGGTGGATTAATAAACATGGGAATAAACCCTTCAGATGTGGC ACTTAGAAGGACCATCAGGGCACCTGTATCTTTACCTGAAACATTTATTGACTCATCGTCCTGTTTCACCGTAGGTTCCCTCGACATGTCTCTGTCTCTT AGAGTCCTTGTTCTAATGATTAGTTTTCTCCAATTGATCATTTTTATGTTCGCTGCAGCAAGTTTTACCTTCCTCAACTTGGGAAGGTGATTTCCAAAAC CTTTACAATAATGTGAATCTTGATCAAGCACGAACAGCATCATTTCCTTCTCAAACATTTAGAGGTAGCTACAAATTTATCACTTGTGAAACCACTTTAC CCTTGGCCTGATAACATAATAGTAGATTCAAAGAGTGAATTTTCATAGATATGAGGGGCCCACGGATACTGATAAGTACATAGGAATGGTAAGCCTTTTT TGATCAAAATGAATTTTTTGTACAAAAGGATCTGTTAATCATTCAGTCATACTGCCGCCATTTTTTTATCTGCTTCACCAACCCACCTGCCAACACGCCT AAAGGATACTACTTGGTAGTGTCCTGATAAGTACATAGGAATAGTAAGGTTTCGTATATTCATCCTCTTATTCTCACTAGTTGGTAGTATCCTATATTGG GCCGCTCTTTTTTTAAGATGTTTGTAATACACGAAAACGTATTTTATGCAGTAAAATGAGTGCAAAAAGCGTGAAGCTTCTCTTTGTGAAAATTCTCAAA GTTCTTTGGCAATTTGGATGAATCTTATTCTTCAAAAACTTTTAGGCTATTCCACAATCACCTTAATTTTAGACCCCATATAAAATTGTTTATTTACCAG TTTTAAACTAGGCTACTTCTGAATGTAAAATCTAATTAAGTTGTTTTATATCTTGCAGGTGTAGTTGACACTAGCAATCTAAAGATGCATATGTAGATGA GTTCTTCTATTACCATTTGTTTGATGAGCTCATTCCAGAAGCATCTTATCCAGATTCTTTCTTTTTAAGTACATAACATAAATTGATGTATACTACTCCA TAGTATAAGTAAGATCATTTTAGTAGCTGTTAACTTCAGTCACCTACTTTTGCACGTTTGAAGTAGAACATAACCAAAGGAGAAAAAGGTTGATAGTGAT GAGCAGATATGTGAGCAGGTACCTAACCCAATGTACTTGAGAGTAGGGAATTGCAACCTTCCACTGCTTTCTTTATTTTAGTCTTTTTGTCCTCTCCAAG GACCCTCTTTCAGCTTTATGTTCAAATTTTGATTACTTTAAGTTGTTTTCCATTAGTAATGTCATTCTCATGTCGTTTTCATTTCATTGTTAGGGTTTGG GGTTTTCAATGTTAGGTTTTGCTTTCCTATGGAATTTCTTAAGCTAGGGATGTTTCATAGGTTTAGAGTTTAAAATTGTATATTTTGGATTTCTTACCAT TCAACTTTTATTACTCTGAGAACACAAAGAATAACAAAACTCCTTCTGCCATATAATTACATATAATTACTAAGAGAATAAAGTATTTCCTTACACAGGG AGATAAATTATCTCCTTAAATCTATTCATTACTTGâBLAST |
Tissue | flowers |
Gene name | LI_gene_61655; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_84615
Blastp | Transcription factor HBI1 from Arabidopsis with 65.62% of identity |
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Blastx | Transcription factor bHLH63 from Arabidopsis with 53.51% of identity |
Eggnog | basic helix-loop-helix (bHLH) family protein(ENOG411190E) |
Kegg | Link to kegg annotations (AT2G18300) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448497.1) |
Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |