| Id Trinity | FTRINITY_DN56624_c0_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_85845 |
| Sequence | AGCTTAATGATATAATTAATAATAATAATGGATAATTGATATGATGAGAGTTACGAAGTGTTGCGATTGAAATAAGAAGAAAAAATAGAAAGGAAAAGGA GTTGCGTAACAACACGACACAAATTTGGCAATCACATCAAAAAGACGTAATTCCATTGCTCTTTCCTTCCTTTAACTCCTTCCTCTGCCCCTCACTCTCA CCTTTATCTATTCCTATTTTTTTCTATACACTATTTTGATTCACTGCTGAAACTTGTTTCTATTTCTTAATCTGAGAGAGATTCTATAAAAATATTAGAA GGTGTGTGAGTCCTGAAGAGTGGTGTAATGGCGTCGGGGAAAGTGGTTGGGTTCGTTGGGTTGGATCAATTAAGCGTGAAGATGGCGTCATCGCTCATTT CCCATGGCTATGCTCTCCAAGCTTTTGAGATAAGTGATCCGACGATCGAAGAGCTTTTGAAGCTTGGAGGAACTAGATGTTCAAGCCCTTGTGAAGCAGG GAGAGATGTTGCTGCTTTAGTTGTCCTAATTTCTCATGTGGATCAAATTAAAGATCTAATTTTTGGTGATGAGGGTGTTTTGAAAGCCCTAAAATCGGAT ACAGTTCTTATTCTCCGTTCAACCATATTACCATCAGCTCTCCATAAACTGGAAAAGGATCTGGCAGAAATTCATGAGATAGCTTATATTGTTGACGCAT ATGTCTCTCATGGGAGGTCTGATGCTATGAATGGAAAAGTTATTATTGCATCATCTGGAAGACCAGATGCCATCGCAAGAGCACGGCCTTTGCTTTCTGC AATGTGTGAAAAGCTTTTCACTTTTGATGGTGAAATTAGTGGTGCCAGTAAGGTTAAAATGGTCACTGAGCTGCTAGAGGCCATTCACTTCATTGCTTCT GTGGAGGCTCTTTCTCTTGGTACTAAAGCTGGTATTCATCCGTGGATAATCTATGATATAATTTCCAATGCCGCTGGAAATTCATGGGTATTCAAGAATA ATGTTCCTCTATTGTTGAAGGGAGAGGTTAAGCATCACATTCTAAAATCTCTTGTTAAGGAGCTGGTAAGATCTATAAACATCTGTAGCAATTAAATTCC TATGTGCACTGTGTTTTGGCCTGTCTAATTGGTCCAGTGAGTTAAGTATGGTAAGCAAGCCTTGCACTTGACTAAACCTCAAGGATAAACAAGCAAATCC ATGCTTGAAGTAAAAGGACATACTTTTATTTAGTTCATAACAAAGTCATATATTACATCATGTATTTTTAGGGTATTTATAACTAAATAACAATCAAATC TTGGCAGCAGAGACTACAAGTTAGAAGACTCACTTAAAATGTTTTTATGTATAGAGTCGGACTTAAGAACATGCCTAAACTATAAGGATAAAAAATATAT AACATATTTCTTTTTTATTTGGCTTATAGTTATAGTATTGCTTTTTATTCTTATTGTTGTTGTCATTATTCTTTTGCGAACCTTTAATGTTGGAAATTGA AAACATTGCTTTCTTAAAGGAAATCATTTTGGATATGGCCAAGTCACTTACTTTTCCACTTCCACTTTTGGCTGCTTCTCATCAACAACTTATTCAAGGT GTTTCAGTTTCAACTGTTTGTTGTGAAGATGATGATGATGGTACAGCATTGATTAAGGTTTGGGAAAGCATTTATGGGGTGAAGTTTTCAGATGCTGCAA ATGCAGATGCATACAGCCCTGAAAAACTGGCATCTGAAATTACAGCTGATTCTAAGAGTGTAAAACGGGTTGGTTTTATTGGCCTTGGAGCGATGGGATT TGGCATGGCAACTCACTTGCTGAGTTCAAATTTCAGCGTAGTTGGTTATGATGTGTATAAACCAACTCTAATTCGATTTGCCAATGCTGGTGGCTTGATT GGAAATTCTCCAGCAGAAGTGGGTAAAGATGTTGATGTTCTCATAATCATGGTCACAAACGAAGCTCAAGCAGAGAGTGCCTTATATGGAGAATATGGTG CAGTTTCAGTACTTCCACCGGGAGCATCTGTCATTCTTTCTTCTACTGTTTCTCCAGCATATGTGAGTCAGCTAGAGCGCAGATTACATAATGAAGGTAA GAATTTGAAGCTGGTGGATGCCCCTGTTTCTGGCGGTGTTAAGAGGGCCTCAATGGGAACACTTACGATAATGGCTTCGGGGTCCAATGCTGCCCTTAAG GATGCTGGTTTAGTCCTAGCAGCCTTGAGTGAGAAGCTTTATGTTATCAAAGATGGTTGTGGTTCTGGAAGTGGAATAAAGATGGTCAACCAGTTGCTCG CTGGAGTTCATATAGCATCAGCAGCTGAGGCAATGGCTTTTGCAGCACGGTTGGGTCTGAATACAAGAATTCTGTTCGATTATATAACAATTAGTGGGGG AACATCCTGGATGTTTGAAAATCGTGTCCCACACATGCTAGACAATGATTACACACCATATTCAGCACTTGATATCTTTGTTAAGGACATGGGAATTGTT ACTCGTGAATCATCTTCTTGGAAAGTACCACTTCACCTATCAGCTACTGCTCACCAACTATATCTATCAGGTGCTGTATATTTACTTGGAATCCTTATGA TACATATGGTCATATGTTTTGTTCACTTCAACTTGGTCTTCCCTATTACATACTTTTTATCGGCCAAAAAATCCAATAAGCCCTGTTACATTTTGGGACC AGGGGAGGAGATTGGGACCCTTATTTTAGATCATATTAAACTATAGGAATAAAGAAAAGAAAGACAGATTTAAGCTTGTTCATCTGACATAATGGCTTAT GGGTGAAGGGTAAAGCATGTAGAATCTATTTATTCATACTCTTCTATTTACAAAAAGAGTATGAATAAATAGATTCCACATGCATTACCTTCGTATTACT TAAACTCTCATTGTCAAAGACCGTCTTATTACTTAAATTGAGGTCATGGTCTCTGAAATAATTGAACAATTCTAGGAGGTTAAATTTCTGTATATGAAAA TCTCAGTATGCCAGAGGATATATATTCCGATATGTAAATAGTAAGCCGTAGGAGTGTACTACTTGTAATGGATTTGAGTAGTTCAGTGGAGGTCTTAAAT TAAATGTCAATGTTGTTATTTTATCCAGACAAGGCAAACATGTAAACGGTAGAAGTTATCTATATAGTTTTCAGTGGGGGGTTTGGGTAGTTTATACTTT GTACGGGGTCATAGATCCAAGCCTCATTGCTACCATTGTACCCAAAAAAAAACTATGTAGTTTTCAGCAAATGATACAAAATGAAAGCAGGGAATAAAAA TATGAATTTTATAAAACTATACAGAGAAATGCTCTGTCAAACTTGTTATGTCACTGCAGGTTCTGCTGCTGGTTGGGGACGGCAAGATGATGCTGGTGTG GTGAAGGTAAACACTCTGCTAGCAAATCATATAGATTTCTGCATTTTATGTTTCTACTTCATTGTTGATTTGAGATTTCTTATATTTCAACTATGTTGTA ACTGGTGTACTTTGGTCCTGACAAAATAATGAAAAACTTGCACGCTTCCAATTTGAAATTGTAATTTAATCATTACATAGAAGAAAATAAATAGGATACT AATGATTCTATTCTGAGTGAAAGTATGTTCACAGTATTAGTAATGATATGAGTACAATATTCGCTGATACAAAGACCTCTGCTCCCCCCCAATCCTCCCT TTCGTCCAGGTCTGCATTGGCACTAACAAGTTACAATTTTGCAGTCATCACTTATTTTTCCATATTCCTGTTCTAAACCTTAAAATCTGAAATTCTAAGA TGATTTTCCCAACAAATGAGAAACATTGAATTCTAGTGTTTTCCCCCGATCTCAAGTCTCTGAACACCATATTTACATCAAAATTTGCACCTGGATGATT ATAAAGGGCTTTCTGAACTTTTATATAGGTTTATGAAGCATTAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61722; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_85845
| Blastp | L-threonate dehydrogenase from Cupriavidus with 50.75% of identity |
|---|---|
| Blastx | L-threonate dehydrogenase from Cupriavidus with 50.75% of identity |
| Eggnog | Dehydrogenase(COG2084) |
| Kegg | Link to kegg annotations (H16_A1562) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457928.1) |
| Pfam | NAD binding domain of 6-phosphogluconate dehydrogenase (PF03446.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |