| Id Trinity | FTRINITY_DN56626_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_85122 |
| Sequence | CCCAGGCCCAACTCATACATTTGGGTTTGTGAATTGTGTTTCTTATCGAAGAAAGAACAAGCGGGAAAAATATAATCGAAATTCAAAGAATTTTGGACCT TCCTTCTCTTCGCTCTTCTCTACACACCACAGTGGAATTCATAAAATTCAAACTTGGCAGCACCCATTTTCCAATTCCTGAATTCATAAGATTACAATGA TTTGCATAGATATTTTGTCCACTGATGATGAATAAAGTTACCTCGGAACACGGTGGCGGTGGCACCTTCCACGCCGTTCATGCAGAGCGTGACCTAGAAT CCAATTGGGAAGTTGACCTAGCCAAGAAACTTGAAGAGTATCTGCTCAAAATTAGCTCTGGTGAAATCACCGGCTACGAAGAAAACCATGATACTCTAAA TTTTGCAGAAGCTGCGCTGTTGCTTCAGGGTTCCATTCAGGTGTATAGTAGGAAAGTGGAGTATCTCTACAACTTGGTATTGCGTGCTTTAGAGTTCCTT TCGCATAAAAGACAGCAAGATCATATAGATGGGGCATCAATCCAACCTGAAGAAAATGGTCCATGTGCTGTTGCTGATGAAGAAAATGATCAATTCTGGG GCTTAGATGACATCCCAGTCGATGAGAAGAATTCCTTGGAGATTTCAACAGACAAAGAAGTGAATTTGAATCACTTTGTAAAACCCCCTTCAAATTTGGT TGTTCTTGAAGGTGACTGCTTAGATTCTACTGGTGATGGTGGGGAATTGGAGTCTTATTTGCTGTCCACCACAGACTTGTACCAGGATTTTATTTTATTG GACGCATCTGATGCTGTTGCAGTTGACGGGTTTATAAAGGGAAGCAAAACTGATATAGCACAAAACGCTGCTGAAAGACCAACCTCAGCCCGTAAAACCT TTCTTTCTCCTACAAGATGCTCTGTGGGAAGTGCTCATAAATCATCGGATGCAAAGAGTCAGCGGGCTAATCCCAACTGTTCCCCCAAACTTAATTGCAG TTATGATGACAACAACGTCCATCCCAGTTCTCCTATCTTTGCTGGTGATGTGGATGATGGATTCGACCCATCTAGGGATTCAGACAATTCAGATGCCGAT GATCCATGGAAACCATTAAATCCTCATGAACCAGGCAACTTGAGGGTGAAGCCTTTTAGGAAAGTGAAAACTTTAAAAAAGAATCGCATCAATGTGACAC GTCAAGTTTCCATGAGCATGTTGTTTCCAGTTGCAAAATTGCATGGTCCTATCAGTTCGGAGCTCATGGAAATGTGGGAGATGCGACATCATGCCCATGA ACATAAAAAAGATTCTCAATCTGCTCCATTATATGAGAAGCTGAGGCAAACTCTCACTAGTGAGTTGCCTGAAACTGGTGGAACATTAGACTTTGAATCT GACAATGATGACAACAGATATGATACTGGAAATCCTGATTTTGATATGCCGGGAAATGCCTACACGGATGAAGATTTTCCTCCTTGGAATAAAGAGCATA AATTTGATGATGTTCATGCCGAGGCTAGTGAATATCCTGAATATCCAAATTCTCAGGAAAGCTTAGAAGATCTTTGTCGCTCGCACTTGAATGCTCTCCT AGCTAGCATAGCCGAATCTGAGAAGCAAACTGAAATGGCTGCTAGGGTTTCAACATGGAAACAGAGAATCGAGCACCATCTGGAAGGACAGGAATCACAC CCACCATTCGATATCCGCGACTATGGTGAGAGAATTCTGGACAAACTATCAGTTGAAGAAAGCAGTAACTCTGTCCTACCTTTCTCTGATCTAGTCAGTG GACAAGAAAAGTATGACGTGGCCCGAAGCTTTTCTTCTCTTCTTCAACTGGTGAACAATGGAGAAGTAAATCTAGAAAGAAATGGACTTGATGGGGAGCC TGTGTGCTATACTTCTATTAATCCTTTTCAAGTTAAGCTCCTTAAGCACAATAAGAATCAGGAGGATGCACAATTTCGTTTGTCGAAAAAGAGAGCGAAG TCTCCAACAAAGAAATCGGCTGCAAAAGGTGACAAGATCAAAGGTGGAAGGGAGAAGTCTCTCAATTCATCTTTACCAACAGGGTCCCCTCCATCAAATT GCAAATTTCCAGTGAAGCTTGGAAAGGCGAGTACCATACGGTTATCTCCCGAGACTAAGAGGAGGCGTAGATCCTTGCGATCAGCAGGGTGACATTGACA ATTAGCAGCCTAATGATTCAATGTAGGACATTTGTTTGTTGCATGGAACTTACTTAGGATAGGGAATTAGGGATGTGTTATTGCAGGCCTAGGTCTCAGA AATACTAACATTCATCAGCTTCCAACTGAATTATTGTTGCTTTGGACATTAATATATTGTTGTAATGATATCTTACGTTGTAACACATTGTATTCTTATT CTTCATGAATGTAATAACTTATAATGACAATCAGTTTAATAATTGTAACTTATCTTCCAAAATTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61729; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_85122
| Blastp | Condensin-2 complex subunit H2 from Arabidopsis with 50.75% of identity |
|---|---|
| Blastx | Condensin-2 complex subunit H2 from Arabidopsis with 50.75% of identity |
| Eggnog | non-SMC condensin II complex, subunit H2(ENOG4111BR3) |
| Kegg | Link to kegg annotations (AT3G16730) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419763.1) |
| Pfam | Condensin II complex subunit CAP-H2 or CNDH2, N-terminal (PF06278.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |