| Id Trinity | FTRINITY_DN56628_c2_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_83786 |
| Sequence | CACTGACTGATGCACAGAGGGATGAATTTGAGGATATGCTCCGTGCTTTAACATTGGAGAGGAGCCAAATAAAAGTGGCTATGGGGTTTTCTTTGGACAA TGCTGATGCAGCTGGTGAGATAGTTGATGTTTTAACCGAATCCTTGACACTTAAAGAAACCCCTATTCCAACTAAAATTGCAAGGCTTATGCTTGTTTCT GATATTCTTCATAATAGTAGTGCTCCTGTCAGAAATGCATCAGCATATCGCACCAAGTTTGAAGCAACGTTACCTGACATAATGGAGAGTTTTAACGACC TATATCGTAGCATAATGGGGCGTATTACTGTTGAAGCCCTAAAGGAACGAGTACTGAAAGTTTTGCAAGTGTGGGCCGACTGGTTTCTCTTTTCAGATGC TTATGTTAATGGCTTACGAGCCACATTCCTTCGCTCTGGGAACTCTGGCGTGATACTTTTCCATTCCATATGTGGTGATGCTCCTGAGGTTGAGCAGGTC ACTTCCGAGGATATGGTTATCGGTGGCAAAACCAACCCAGATGCTGCATTGGCAATGGGTCGAGGAGCTGCAACGAAGGAGCTAATGAGTCTTCCTCTTG CTGAGCTTGAAAGGCGTTGCCGACACAATGGGTTGTCACTTGTTGGTGGTAGAGAAATGATGGTTGCTCGGTTGCTAAGTCTTGAAGAGGCAGAAAAGCA AAGGGGCTATGAACTAGATGATGAATTGAAGTATGCCCAAAACCAAGCAAATTCCGGGAAATATCCGAGCAGTCGGCGAGAAACAAGCACTGAGCCAGAA ACAATGGGATTATCTGCTTGGAATCGCTATGGTGATGATTCGCAGTCACAAGGCAAAGAGCCTGTACCTTCAGTGCCAACCCTTTCTATTCCACAGCCTG AAATAAAAGCCTTCACGAAAAAGGAGAAGAGTGACCCAGTTTTGCCAGCCTCTAAATGGGCCCGGGAGGATGACGAAAGTGATGATGAGCAAAGAGGTGG AAAGAATATTGGGTTAAGCTACTCATCTTCTGGTAGTGAGAATGCAGATGATGGTCTTATTAAAGCTGATGAATCAGAGTCTGCTTTTGATACAAGATTA TCAGCTCATGCTGACAGTGGAATGAATGAGGAGCAAAGACAAAAGCTGAGACGCATGGAGGTTGCTTTAATCGAGTATCGCGAGTCTCTTGAAGAAAGAG GGATTAAAAATTTGGAGGAAATTGAGAATAAAGTTGCAACACACCGGAAACGACTGCAAGTGGAGTGTGGGTTATCAGATTCTGGTGAAGATGGTCTAGG CAATAAAAGAACATCTTCAGAGAGGAGGGATAGGCATGATGTCCCAAGGAAGCGACACCGCAGCCATAGTCCAAGTAATAGCCCACAGCATAAATTATCA GGCAACGTCAGAGATAGAGAACATGATTTAGAAAGGGACCGAGACAGACATAGAGATAGAAGTCGTGATTTTGATAGCGATAGGGGAAGGGACCGGCACC GGGAAAAGAGTGGAAGCAGAGAGAGGGAGGATCATGATAAGGAGAGAGGCAGGGACCGTGAAAGGAGAAGACAGATCAAATAAGAACATCTCACAAACTG TAAACATCATGGAAGATATGTGAGCTCAATGATTTGCATGCAGATTGGTGTTTGTAAGTGTGTTGGACATTTGGTCTTTTGTTATCATAGTTGGATTTTG ACAATGTTTATAAACAATCTTAAAAATTGCTGAATAGAATCTGGCCTACACACACCCATACTTTTTTTTAGATTTGAGGTCTCCAATCATGTTGATGAAT TAGTCTCTGGTCGTGTTGCACGTTGCGTATATTATAATCGATAGGGTTCTGTCCGCCGAGTATCGGGTTACCAAACTGAGATTCCGCGCTAGTTTTCAAT GAAGTTTATATATTTTATTGTCTGTTTGTTGATTTGTGTCATAAAGGTTAAACTAGAATCTCTCAAAAGATGTGATTTTGTTGAAGGGTAAGGTGTAGTT TAGTGATGTGATGATTTGTTAGTAGAATTATGATTACTTGAACATGTCTAGATTCTAGAAAGCTTAGTTATGGTTTGATTTTCATTTTGTTGAGATGTAT TTTACACTTGGTGAAGGTATCTTTATCTTTATCTTATTCTCTTTTGTTTCAACTTTGTTAAGAGTATTATTAGTTTTTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61753; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_83786
| Blastp | Protein RRC1 from Arabidopsis with 63.65% of identity |
|---|---|
| Blastx | Protein RRC1 from Arabidopsis with 64.83% of identity |
| Eggnog | U2 snRNP-associated SURP domain containing(ENOG410XSUI) |
| Kegg | Link to kegg annotations (AT5G25060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421693.1) |
| Pfam | cwf21 domain (PF08312.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |