| Id Trinity | FTRINITY_DN56635_c1_g5_i6 |
|---|---|
| Name Transcript | Ll_transcript_84248 |
| Sequence | CTTACAGTCTAAACAAGTTTTCTTTTTATCTTTTGTTCTTTCTTTCTTTCTTTTTTTCTCTTCTTTCTCTTCTTTGCAGCTAAGCAATTTGCTTTGCAAC CCAGAGAGACATGAATCGGTTGAAAGAGAAAAGAAGAAGCAAAACCCACAATTATTATTCACTATGAAAGCTATCACCTTCTTTATTATCATCCTTATCA CTATTACCACATCGTCTCTATCATGCGCAAAAGGAGTTAACACTATTCAATTTCAATTCCACTCCTTAAACTCAAGCAATGAATCTCACCCTAGAAGAAT CCTCCACCAACCATTGTTCCCTGAGAGTTCTGTTCCACCACCATCAACCACCGAGTCACCGCCGACGGAAGCAGAGACTCCTCCTTCTCCTGACGGTAAC ATTCCATTCTTCTACGAGAATCCACCGGGACCACCGCCACCTCAATTAGAACCAATAACTTCTAACGCTACACTCTCGAATTCGAACCCAACGCAACCTA ACAAGGGAACGAAGAAAGTTGCGATTGCGATCTCGGTTGGAATTGTGACTCTTGGAATGTTAACTGCACTTGCGTTCTTCTTGTACAAGCATAAAGCTAA ACACCAAGTGGAAACTCAGAAGCTCGTGGCTCGGGACCCGAACCCGAACCTGGAGGATTCGAGGGCCCCACCATCGTCTAGCATTCTCTACATTGGAACA GTTGAGCCAACGAGAACGGAACCAAACAGGTCACCGTATCAGAAGCTCAATTCCGTTAAGCGATCAGAACGGTACCGTCCAAGTCCTGAATTGCATCCAC TGCCGCCGTTGAGAAAGCCTCCTTCCGACGGGAATTACCCGCCTGCGGCGTCTCCGTCATCTTCTGACGAGGAAAGTCACGCCACGACGGCGTTTCATTC GCCGCAAAACTCGTCGGTGAGTTACGATGAAGGGTATTACACGCCGGTTTCACGTCAGAGTTCTCTCGTTAAAAGTAGCCCCGCCGCTGCCGCACCACCA CCTCCTCCTCCGGTTCCGTTCTCGAAGAGAACTTCCCCTAAGTCTCGTGTCTCGGTTTCCTCACCGGATATCAGGCATATCATAATTCCATCTATAAAGC AGGCTCCGCTGCCGCCGTCTCCGGCACCACCACCACCACCTGATAAACAAGTGAATTCAGGAAGTTCTAGAAGACCGAAGTTTTCAGCACCTCCCCCAGC TCCGAATTTAACGCATATTCGATCACCAATCAACAAAGCCACAAAGGTTTCCAGGGCTATACTCAATGCTCCTCCTCCTCCGCCACCTCCACCGCCCCCT CCACCACCGAGAAAAAGAGAGTCTCCAGTCGTTAGTGTTTCATCGACACGTGAATCAAGAAACGAGAAATCTTATAGTCCAAGTGAAGGAGGTGGTAGTA GTAGTGTTAAAAAAGGGTCACATTCAGAGAATGTTGAGAATAACAGTGTGAATGGTGGTATAAGGTTTTCTGAGGAGAGGGTAGAAGAGAATGAGAAACC AAAGCTGAAAGCTTTACATTGGGACAAAGTTCGAGCAACCTCTGACCGTGATACTGTGTGGGACCACCTCAAATCTAGCACATTTCCATTAAATGAGGGC ATGATGGAGTCCTTGTTTGGCTGCAATGCCACAACTTCTGTACCCAAAGAAGCTCCAAAAAAGTCAGTTATCCCTTCCATTGATAAGGAGAACAGGGTTT TAGACCCCAAGAAGTCTCAAAACATAGCTATACTAATAAGGGCACTCAATGTCACAAGAGATGAGGTGTCAGAAGCTCTTTTAGATGGGAATCCGGAAGG TTTGGGTGCTGAACTATTGGAAACTCTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAACTTAAAAACTATGATGGTGACCTATCAAAACTTGGA TCTGCAGAAAGGTTTCTTAAGGCGGTGCTTGATATCCCTTTTGCATTTAAAAGAGTTGAAACTATGCTATATAGGGCCAACTTTGATGCAGAAGTTAACC ACCTTAAAAAGTCTTTCCAAGCCTTAGAGGTCTGGATAAGCTTATATCAATCCTCTTGTTATCTTTTATCTCTTGCTGTCTTCAAGAAACTAATCAAATA GTTTGTTAAAATTCGTCAGGCAGCAAGTGTGGAATTAAGGAACAGCCCGTTATTATTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAAT GTCGGCACCAATCGAGGTGATGCTAAAGCATTCAAACTGGACACACTCTTGAAACTTGTAGATATAAAAGGAACAGATGGAAAGACTACATTGCTCCACT TTGTGGTCCAAGAGATCATCAGATCCGAAGGTGCGGATGAAGAATCAGCAAATGAGAATGTCAAGAGCCAAATGGATTCCAAATTTAATGAGGACGAGTT TAAGAAGCAAGGATTGCATGTTGTTGCTGGGCTCAGTAGAGACCTTAGTAATGTAAAAAAGGCAGCAGGAATGGACTCAGATGTCTTAAGCAGCTACCTT TCGAAACTTGAAACAGGGCTTGATAAACTGAGATTGGTTTTGCAATATGAGAAACCAGATGTGCAAGGGAATTTCTTTAAGTCCACAAAACTATTTCTCA GAGATGCTGAAGATGAAATTGCTAGGATCAAGGCTGATGAGAGAAAGGCCTTATTCCTTGTGAAAGAAGTTACAGAATACTTTCACGGCGATACAGCAAA GGAAGAAGCTCACCCTCTCAGAATTTTTATGATTGTAAGAGACTTTCTAAATATTCTGGATCTAGTGTGTAAAGAAGTTGGAAGGATGCATGATAGAATT GTTGGTGGTTCTTCTAGATCCTTTCGGATAGCTGCAGCTGCATCATTGCCTGTTCTCAACAGGTACAATGCAAGACAAGATAGAAGCTCTGATGAGGAAA GTTCATCCCCATAGTACTGTGAATATGGAAGAAATGACACGTTTCTCAAAATAACAGTGAAAGTAAGTGAATGTTTTTGCAGATTTCCCCTGGATCAAGT TCAATGGGTTTAAACTTGAAAAGGATTTCAACAAAACCCGAAAGAATCGCATTGGGCTACTAATAGTGATGAAGCTTCTTCATGGCAGGGCTATCTACAT TGAACTTCATATGAAGCATTAATGAAATTTTTGTGGGGTGCAGGAGATGACATCATTTTCTTTCATCAACTCCAACACATGGTAGAATCATATAGATTTT ATTAGATTAGAGTTCCACACATTTTCTTATACTAGAATGTATTGAATTACCAAAGAGGTTCCTATATGTATTTTTTGAATCAATCAATTAGTAATAATAA ATAGCAGTATTGCAGCAATTCCCTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61810; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_84248
| Blastp | Formin-like protein 8 from Oryza sativa with 67.69% of identity |
|---|---|
| Blastx | Formin-like protein 6 from Arabidopsis with 67.32% of identity |
| Eggnog | inverted formin, FH2 and WH2 domain containing(ENOG410XQR0) |
| Kegg | Link to kegg annotations (4331986) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444920.1) |
| Pfam | Formin Homology 2 Domain (PF02181.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |