| Id Trinity | FTRINITY_DN56638_c3_g4_i5 |
|---|---|
| Name Transcript | Ll_transcript_84989 |
| Sequence | AAAAGATATGGTATTGTCTCTTACATGACAGATATATTTTATACTATTGTCTCTTACATGGCAGATATGCTATCGGTAGTAGGACATCAGATGTGTCTCC TCACACACACTCTCCTATCTGCTCCTGAGAGGGTGAAAAGATCAAAACAAAAACACAGAAATCCCTAAAACCATTTCCTTCTTCCCTCCAAGTAGCAGCT TCAAATTCCCACCCTTTTATACTTCAAACCTTTATCCCCTTACATACATTGTACCTTGTTTCTTGAAAACCCATCACTTTCTTTTTGACCCATCATTACG AAGAAAGGAACCTCATTTCACTATCTCTGGGTTTCTCCAAACACCTCCCCAACTCCTCACAACTGAAAAAAATATCACTTTTTTTAATTCCACAATGCCA AATCTAAAGCCCATTTCACAAACCATTCTAACCCTCTTCCTTTCACAGCTTCTCCTCATCAATGTAGCTCAAGTAACCTCAAAATCCACCATAGAACCTT GCACAAACTCAGACTCATGCAATGCACTCCTCAGCTACACTCTCTACACTGACCTTAAAGTCTCAGAGGTAGCTTCCCTCTTCCAAATTGACCCAATTTC TCTCCTAACAGCCAATGCCATAGACATCTCTTATCTTGATGTGGAACACCACATCCTCCCTTCAAGACTCTCCCTCAAGATCCCTATCTCCTGCTCCTGT GTTGATGGAATTCGCAAAAAAGTGTCCACACATTACAAGACTCGTCCATCGGATAGTCTTTCGTCGATTGTGGATTTGGTCTATGGAGGTCTTGTATCTG CTGATCAGCTCAGGGAGGCTAATTCTATCACTGACACTAATGTGCTTGATGTTGGGCAGAACCTTGTTGTGCCCTTGCCTTGTACTTGTTTCAATGGCAC TGATAACTCCTTGCCCGCAATTTATTTGTCTTATGTTGTGAAGCAGGATGATAATTTGGCTGCAATTGCGGCTAGTTATTTCACAACTCTCACTGATTTG ATGAATGTTAATGCATTGGGAAGTACTGCTATTGCTGATGGTGATATTCTTGCTATTCCAATACCAGCTTGCGCTTCAAATTTTCCAAGATATGCCGCCG ATTATGGTTTGCTTGTCCCTAATGGAAGTTATGCCATTACAGCAGGCCGTTGTGTGCAGTGTAGCTGTGGACCAGAAACCGGGAGTACTAACTAACTAAT ATTTTTAGTTTCTGAATTTGTATTGTATGCCAGCTTCTCTGGCTGTTTCATGCTCCAGCATGCAATGTAAAAACAGCAATCTTATGCTTGGGAATGTTAC GGTGAAACAGAGTGGTGGTGGCTGCAATGTTAGTTCTTGCAATTATGATGGTATTGCTAACGGCACCATAATAACAACGTTGTCCCCGTCTCTTCAGCCT CGATGCCCAGGACCGCAAGAATTCCTGGATCTTATAGCTCCACCTACAACTGTTACGAGGGAATCAATATTTGCGCCAGCGCCAGCACCTCAGTCAGATG GAAGTGGTTTAATAACACCCAAATCCTCGGTGTTACCTTCAACAGGATTCTCACCTGCAAATGGCCCTATTAGTGGGATTGCTTCTGATGCTTCTGCCGC TTGCTCCTTGGTGAATCCATTACCAACCACTATGGTATCTGCGCTTTTATTATTGTTTGTCAAGTTGATGCATCCTGCAGCATTGTAATCTTCTCAATTT CGTGGTTCATTAGGTTCTGCCCTGTTACTTTGTTTTCACAAATGCTTCTATCTATTTATTTGTAGTCTTTAACTGAATTGATTTGTGAATCTGGAAACTA CGGGATTTTGGGTTTCGTCACACGTTTAGCCTTTTACTTATTGGTGCTTTACCGTGCTATGTTGTTCTGAACTCTGACCACGGATAGGACTATTCTGTTA TCAATCACTATAAAGGCTGTAAGCCTGTAAGAATCTGATGGTGATGCCTCTGGAGACACTTGTAATTATGTACGCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61833; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_84989
| Blastp | LysM domain-containing GPI-anchored protein 1 from Arabidopsis with 70.47% of identity |
|---|---|
| Blastx | LysM domain-containing GPI-anchored protein 1 from Arabidopsis with 74.57% of identity |
| Eggnog | lysM domain-containing GPI-anchored protein(ENOG410YAMN) |
| Kegg | Link to kegg annotations (AT1G21880) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415666.1) |
| Pfam | LysM domain (PF01476.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |