Id Trinity | FTRINITY_DN56638_c3_g4_i7 |
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Name Transcript | Ll_transcript_84991 |
Sequence | CGACTAACACCTTTGAAAGTCAAATAAACTTTTCCTCTCTCTCTCTCTCTCTCTTTTCTCAGTCCTGAAGGAGTGAAAGATCAAAACAAAATCACAGTAA ACCCTAAACCCCTTTTTCTTATCCCATCCCACCAACTACAAATTTTCACCCTTTACTTCAAACCTTCACTCCCTTGCAGACATTGTACCTATTACTTCAA CTCCTTTTCAAATCCATCACTTTCCTTTTTAACATCACTGCAAACAGTAGCTTCATTTCACTCTCTTCTGGTTTCTCCAAACACCACCCATATCTACTAT AATCTGAAAAAGATCACTTTTTTAACCTCTTCTTCCAAGTTTTTCTTCAGGGGTGGCCACCATTCTCTCCACCACCTCACTTTAAAAAGTTTAAGTCACT GCCACAATGCCAAATCAAAAGCCCATTTCACACACCACCTTGGTTCTCTTCCTTTCACAGCTTCTTCTCATCAATGTAGCTCAAGTAACCTCAAAATCCA CCATAGAACCATGCTCAAACTCAGACTCATGCAATGCACTCCTAGGCTACACTCTCTACACTGATCTTAAAGTCTCTGAGGTAGCTTCCCTCTTCCAAAT CGACCCAATTTCTCTCCTAACAGCCAATGCCATAGACATCTCTTACCCTGATGTGGAACACCACATCCTCCCTTCAAGACTCTTCCTCAAGATCCCAATC TCTTGCTCTTGTGTTGATGGCATTCGAAAATCGGTTTCCACACATTACAAGATTCGCCCTTCGGACAGTCTTTCGTTCATTGCGGATTCAGTCTATGGAG GTCTTGTATCTGATGACCAGCTCAGGGAAGCTAATTCTATTACTGACCCTTCTGTGCTTGATGTTGGGCAGAGCCTTGTTGTGCCACTTCCTTGTACTTG CTTCAATGGCAGTGATAATTCGTTGCCCGCGATTTATTTGTCATATGTGGTGAAACAGGTTGATAGTTTGGGTGCAATTGCAGCTAGGTATTTCACCACA CTTACTGATTTGATGAATGTTAATGCCTTGGGGAGTACTGCTATTGCTGATGGTGATATACTTGCTATTCCAATACCAGCTTGCTCTTCAAATTTTCCAA AATATGCCTCTGATTATGGTTTGCTTGTCCCCAATGGAAGTTATGCCATTACAGCAGGCCATTGTGTGCAGTGTAGCTGTGGACCACGAAACCTGAATTT GTATTGTATGCCAGCTTCTCTGGCTGTTTCATGCTCCAGCATGCAATGTAAAAACAGCAATCTTATGCTTGGGAATGTTACGGTGCAACAGACTGGTGGA GGTTGCAATGTTACTTCTTGCAATTATGATGGTATTGCTAACGGCACCATAATAACAACGTTGTCCCCGACTCTTCAGCCCCGATGCCCAGGACCACAAG CATTCCCTGATCTTATAGCTCCACCTACAACTGTTACGAGAGATCCGATATTTGCGCCAGCACCGGCACCTCAATCACATGGAAGTGGTCTAACAACACC CAAATCCTCGGTGGTACCTTCAATAGGATCATTTCCAGGATTCTCACCAGCAAATGGTCCTATTAGTGGGATTGCTTCCGGTGCTTCTGCCGCTTGCTCC TTCATGAATCCATTGCCTGCCACTTTAGCATCTGCACTTTTGCTGTTGTTTGTCAAGTTGATGCTCCCGGAAGCATTGTAATCTTTTCAATTTTGTTGTC GATCTGGTTCTACCCTGTTACTTTGTTGTCACAGGTGCTTCTATCTATTTATTTGTACTCTTGAATTGAACTAACTTTGAATCTGAAAACTACCGGATTT TGGGTCTCATCACATGTTTAGCCTTTTATATAGTATTTGGTGCTTTACTGTGCTATGTTTGTTCTTGGAATATTCTGTTATCAATCATTACTAATGCTGT AAGAATTTGATGGTGATGTCTTTGTAGACACTTGTAATTATGTATGTTTCTTT BLAST |
Tissue | flowers |
Gene name | LI_gene_61833; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_84991
Blastp | LysM domain-containing GPI-anchored protein 1 from Arabidopsis with 67.75% of identity |
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Blastx | LysM domain-containing GPI-anchored protein 1 from Arabidopsis with 73.06% of identity |
Eggnog | lysM domain-containing GPI-anchored protein(ENOG410YAMN) |
Kegg | Link to kegg annotations (AT1G21880) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417576.1) |
Pfam | LysM domain (PF01476.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |