| Id Trinity | FTRINITY_DN56647_c1_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_83519 |
| Sequence | TATTTTTCATGCCCTCATTCACACGATTCTTTTGTTATAGAAAAAATAGAATTAATTTTCTATTTTGGTTCGATAATAGTAACGGAAAAGATGAAATTTG GAAAGAGTTTGAGTAACCAGATTGAGAAAACACTACCACAGTGGCGAGACAAGTTTCTTTCGTACAAAGAACTGAAGAAGAAGTTGAAGCTTGTGGAGCC TGCTTCTAAAGGGAGTGATGAGGAGCGAAGTGCTAAGAGGGTTAGGGTTGATGGAGAGAAGATGTTGAAGGAAGAAATTGATTTTAGAAAGTCGTTGGAG AATGAGGTTTATAAATTCAATACTTTCTTTGTTGAGAAAGAGGAAGAGTGTATTATAAGATTCAAGGAGTTACGTGATATGGTGGCCAAAGTAAAGGATT CTAACGAAGAAATGATGAAAATACGCAAAGAAATTGTGGATTTCCATGGAGAGATGGTCTTGCTCGAAAACTACAGTGCCCTTAACTACACAGGTTCTTC CAACTTTCATAATATTATTTGTAGGTCTCTGACTAAAACATAGTTTCATAGTTCACGGTACAGATTTTATTGCGCCGTATTCGACTACGCGGTTCATCCA CTTTTTACATTATTACAAGACTTTTTTACAAGGAACCGTACGCAGTCGAATCCTGGACATAGGCCTAAACGAGAGAATTATCTATGGACTAGAATACTAG ATAGCCTCAGAGCATGTGTACTAGCTGTAAAATTTTCTCAAGCATTATCCAAAATAAAATTTGACTAAAACAATGTAGCAGAGAGTCTAGTGAATCATAA TTTGATTCATTTCCATTGCTTCTACGGCAACAATGTAAAACAAAAAGTATTTTTTTGTTGGAATTAAGGATCTATTTCATATAAATGTGTTCTTTTTAAT GAGCATTCAGCTATTTTGAACCTCTGTAGTTGCTTCTTATTCCTCTGTTGCATAGTAATTTGATTTTTATAGACAAATTTGAATTCTGCAAAATTCAAGA GTCATGTATGCCATTATCAGCCTAAAGTTGGTATTGCATAAACTGTAAATTTTGTCACTTAAGATTCATTTTTCCATGCCTATTAACTGGTTAAGATATC TAATATTCCCTCTCTTTTTGCTCTACAGGACTGGTGAAAATACTAAAGAAGTATGACAAGAGAACTGGTGCTCTCATTCGCTTGCCATTCATTCAGAAGG TCTCGCAACAGCCTTTCTTTACAACCGATCTGCTCTATAAGCTGGTAAAGGAGTGTGAAATCATGCTAGACCACCTTTTCCCGGTGAACGATCCTCTTAC TTATGGTGAGACAACTCCCCAAGTTGAAGGGTGTGATCCTTCAACTTCGGGCACTAGCAAGAGTGATGCCCTGCTGCTCATACCTAAGGAGTTAGCCGAA ATCCAGTACATGGAGAGTCTCTATATGAAGAGTACCATATCGGCTTTGAATGTTTTGCAGGAGATTAGAAGTGGAAGCTCGACGGTTAGCATGTTTTCGT TGCCGCCGCTGCAGATAAGTGGTTTGGGAGAAGCATGGAAGAAAATTCCAATTATGGAACAATCAGCCAAGTAAAGTAACCTGCAGTTTACATTTAGGAA TTAAGGATAGTTTAATGGGATGGCTATTCCCTCTTTATTTTTTCTGTTAAAATTTGATGTTTCTGTCATGGCATGCTTTAGATACCAACACAGATATGGG ATGCTAAATATAGAGAAAAAATGTTGATCTCTTATATCTTAGGTTCCATGTAGTAATATTACTGACGCTCATATTCAATATATAATGTAATTAAATATCT TATATCTGCTTTGTAAGACAATGTTATTGGGCTGTTTTGGAAACTTAGCCTGTTTGCTTTGTGAAAATATTTCCTATTTTCATTTCTTGAAAACAGTTTT CAATTTTAAGAAATGAAAATTTTAAAAATGTGTTTGGTTTCATTTGATAAATTTTTGTTTCCAAAGAATGAAAACAATGCAATACGTTTATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_61911; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_83519
| Blastp | SPX domain-containing protein 1 from Arabidopsis with 70.8% of identity |
|---|---|
| Blastx | SPX domain-containing protein 2 from Arabidopsis with 66.45% of identity |
| Eggnog | Vacuolar transporter chaperone(COG5036) |
| Kegg | Link to kegg annotations (AT5G20150) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_017442764.1) |
| Pfam | SPX domain (PF03105.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |