| Id Trinity | FTRINITY_DN56662_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_83223 |
| Sequence | ATTTTTAGTTTTTCATCAAAGATTTTCCACTTTAATTGATATTTTTAGAAGAACAAAAAAACACATACACGGAAATAAACACATGTATATCTCAACTCTT AACAAAACCATCCAATGAAACATTTAACCGTTTCCCATAATTAACATATTCCAACCAATTGTGTATCATTTTAGCTTGGTTCAATTCATTCCCTTTCTTC TCACAATCCTCTTTCTTCTCATTACTCATCAGAGATCCATTCATTCATGGCAGCGGCACGGCGTCTCGGCGACCTTCAATCCGAACCCGGCAACAACATC TGCGTCGATTGCTCCCAGAAAAATCCTCAATGGGCCTCCGTCTCCTACGGCGTCTTCATGTGTCTAGAATGCTCCGGCAAGCACCGTGGCCTCGGCGTTC ACATTTCCTTCGTACGATCCGTTAACATGGACTCCTGGTCCGAAATCCAGATCAAGAAAATGGAAGCTGGTGGCAATGACAAATTGAACGAGTTCCTTGC ACGTTACGAAATCCCTACGGAAATTGATATAGTCACGAAATATAACACCAATGCTGCTTCTGTGTATAGGAATCGAATCCAAGCTATCGCTGAAGGTCGC GGTTGGCGCGATCCTCCTGTCGTAAAGGAGATTCTCAAGGGAAAGCAGACCATCGGCGGTGGCGGCGGTGGTGGTGGTGGTAGTGAGGGTGGGAGTATTC GTAGGAATAACGGAGGGTGGGAAGATGATTGGGGTGTTGATGATGGTTTTGGGAATTCTGGTGATATAAGGCGTAATCGTTCGACCGGGGATTTCACGAG AGGTGGTGGTGGCGGGATGCCGGTGAGGTCGAGGTCGACGACGGATTTCGCCCGATCGGAGTGGGAGGCTTCGGCGGCAAATAAGGAGAGTTTTTTTGCG AGGAAGATGGCGGAGAATGAATCAAGATCTGAGGAGCTTCCACCGTCGAAGGGTGGAAAATATGTTGGGTTTGGATCGAGTCCTACGCTTTCTTCTCAGA GGAGCAACCAGCAAAACGATTATTTTTCTGTCGTTTCTCAGGGGATTGGTAAATTGTCGTTGGTTGCTGCCTCTGCGGCTCAAGAGATCACTTCTAAGGT CAAAGAAGGTGGTTATGATGACAAGGTCAATGTTGTTTCTCAGAAGACATCAGAGATTGGACAAAAGACATGGGGTATAATGAAAGGGGTCTTGGCTATG GCTTCACAGAAGGTTGAGGAGTTGGCTGGAGATGGTCCAAATTCGAAGACTGATAACTTGCAGCGAAATGAGAATAATAGAAATGGTCACTCTCAGGATT TCGATCAAGAGAATAAAGGCTGGAACTCTTCGATGGGAAGAGAACAATCTTCATCATGGCAATCTAAAACTCATAGCGCAAGCTCTTTGGATGAGTGGGG CTACAAAGATAGTAGGAAGGAAGAGCCAGCTAAAGGATCGACTCGTTCGTCAAGTGGGCAGTTCAATACTTCCAACTCAAGCTCTTGGGATGATTGGGAC CACGAATATCCTGTGAAAAAAGAACCAGCTAAAGGACCAGCTTCCCATACTAGTGATGCTTGGGCTGGCTGGGATGATGGATTTGATAGTCGGAATGCAT CTAATAATAAAACTGTTGGTCATAATGGGAAGTCAGATTCCGCTTGGACTGGAGGAGGATTTCATTAAGGTTTGTAAGTTGTGCAATTCTCTACGTAGAC TTTGGGATCAAAACTGGACGTATATAAAGGAAATGGAACTAAAGAAATTTTTCACACGATATTTGAATGGTTTACATTTGGAATTATTTTTAGCCCAGTA CTGTTGTCTATGTGACTGAGTTATTGTCGAACTCATAATCTGCTTTGTAGGCCATTAGATAACAATTATGCCACACTTAAACCTTTTCTAAATGTCTCAG ATTATGCACAATCTTCTCTCACATGCCATGCATTGATGAATTTTCATTTTAAGCTGCATAACTACAAAACTTATTGAACTTCTAATTTGTGCTTTTTTTT TTGTGGGGATGGATGGGAAGGAGGATGAAATGCCGGAAAGGAGTTAGCACCTTGAGATTGAGAACCACCATTTTGGGTTTTATCATGTGATTGTTTTTGT GTTTAATATCTATATCTTGTTCTAGACTTAAAATTCAAGTGCATTTCTTTGAACTAAATTGTTTCTTGTTATTCTTGAACCAGGTTGACCCTATATTGTT GTTATCAGTTTCAAAATTTTGTCATGTGACAAAAATATGGTAACTTTCTGACCGAACATGATCGATGTGACAGGATTGTCAAATATAAGTTTCTTGGTCA CTGTTAAAAACCAGACCTCACAAGTGCAGGGAGAATGATTTTATTGAGGTTAGTATATTGTCAGCAAGACCCTTCTGTAACTTATGTTCTTTTTAATATT TTGGGAACTTCTGTATTTTTAAGGAAATGTACTTTTACAATTACATGTACAAGTATCCAAAGAAAGGGCTAATTGCCCAAATTTAAGAGAACTATCACCT GGAAGTGTGGTGAAACATTATCATGACATCAAAATTTCATTATTGTTTTAAATTTGTAGCATGTGGTTTTTGCATCGTTATTTTCTCATAATTTATCATT ATTATGTGTCAAAAAAAAATACAATTGTGGAGATCAAGCTTCAATCTTTTGCCATCTTATGGAGTATCGTTATTATAAAGTTTTTCTGGTGAACAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_62038; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_83223
| Blastp | ADP-ribosylation factor GTPase-activating protein AGD7 from Arabidopsis with 56.22% of identity |
|---|---|
| Blastx | ADP-ribosylation factor GTPase-activating protein AGD7 from Arabidopsis with 53.02% of identity |
| Eggnog | domain, ankyrin repeat and PH domain(COG5347) |
| Kegg | Link to kegg annotations (AT2G37550) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440954.1) |
| Pfam | Putative GTPase activating protein for Arf (PF01412.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |