Id Trinity | FTRINITY_DN56670_c2_g6_i3 |
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Name Transcript | Ll_transcript_84132 |
Sequence | ATTTACCAACAAATTATTGGTCCGGTCTAGTGATGTAAAGTACTGTTATATATTAGGTAGACCAAAAAGTTAAAGGTTCGATTCCAGTATACAACATGTA GGAGGATCAATTATACACCCAAAAGATTTAACCATAGGATGATTGGATACCTTGGTCATACCAAAAACAAATCAAAGATAACTTCTTCCTACATAACAAA AAGATAGTAAGCATCACAAGGTACCTAATATCATTGGTCATTATGATCCTTCTATTACAAGTACTAATAATGTGACACAAATGTCTTTAAGATACTTTAT GCTATCTATATATTCTGCAACAAATAACCCTCAACAGAACTTTTAAATCATATTTTTATAAGTTTCTTGGTGGCAAACAAATTGTGTATCTAATTCCAAA TTCACATACAACACTTCAAAATCCTATCTTTCTCACTACCCATATGATGGAAGGAGATAAGTATATTCAAGCATCATCAAAAGGAAAAAATGTTGAAAGC TTATCTTCTAGCTCAGAGTTACAACATCAAAATCCAAGGAAGAAAAAGAACAAGATAGAGAACAAAAGGAGGTTCAGTGATGAACAAATAAGATCACTTG AATGCATATTTGAGTCAGAGTCAAAGCTTGAGCCAAGGAAGAAGTTGCAGCTTGCAACAGATCTTGGTTTGCAACCTCGCCAAGTTGCTATATGGTTTCA GAACAGAAGGGCTAGGTGGAAATCAAAAAGGATGGAGCAAGAGTACAGAAAACTCAGAGATGAATATGATAACTTAGCATCAAGGTTTGAGTCTCTAAAG AATGAGAAAGAATCTTTACAACTAGAGGTATAATTTTGGTTCTTTTAGCATGATTACTTATGGTTTTAAAAAATTGTGGTATGCAACTGCAACCGCAATT ATCCGCAATTACAGTAAATGCAATATAATCTAGTTTGCTACGGAAGCTTTAACTGTGCTGTCGTTCGATCTATCTAGCCGATCTTGTGGCAGTAAGGCTT GATTTTTGTTGTACACAAATTTTTATAAACTACTTTTATAGAGTTGTTGATGAGCATAAGAAGATAACAAGTAAACAATGTGTAATTATTATGAGTGTGA ATAGCAAAACTGATTGGGTTATTTGTTCTTTTTATTATACACAGTTGCAGAAGCTAAGTGATTTGATGAGGGAATCTCATGAAGTGAAAGTAGCCAAGGA AAATAGCACAGAAGATGGTGTTTCTGGAAGTGGATACAATAATTGGAGGGTTGAAATGAAGCCAAGTTTTTCAAATGAGGGTTTGGAAGAGATAGAAGGC ATGCATTATTCAGATGATCAAAATGAGAAGAGCATAAGGAGTGAAAAATCTGAGGAAATAGGAAAACAAGTTCTGAGAATGGATGAACATGAAGAGATTC CTTTGCCCTTACTTGAAAAATGGTACAATGTGGATCCAAGTGGTATCTTAGATCAATCATGCAGCAGTTCACAATGGTTAGATTTATGGACTTGAAAGAG TGAAACAAAACCACACTCTTGCATATTTGATGTTAAAATATGTCTCAGAGATGAAGTTTTGTAGGCTTGATTTGGATAGAGATAGAATTATGATAGCCTT ACTTAATTTATTCTTTAGAGATTTGGAACATGAAAGAATGTTCCATATTTGTGTTCATGTTTCTTGCCTTTGAAATCAGTGTGTGCTTGTGTTGTTTATT TTATTCTTATCTTATTCCTTTTCCATTGTTGGGTTACAATGGGTTTATTTAAATCTAAGACCTTTATACATTCTTAAGATACCATCTATTCATATATTAA CATGTGTGATCATTAGGATATTACTAGGACACAGGTATATTAGGACTTAATGAAGCTGAGTTTGTCAATTTCTTAGCTAGTGTTAAATACCCATTTGCAT TTTTTACTATGTATACAATAAATGCAACTGCAAATCAATTTTGTTTAATAGTATTTTAGTATATGGAAATCTGTCATAAAGTTCTGAAGTTGTGCACGAA TTATTCTTATGCTGGATAATATGGCAGATATACAAGCCTAGAAAAGGAATTGTTTCAGTTTATCTGATTTTCTTTTGATAGCTACTCTGACAAGATTACC TTTTAATCCCTGAATATAATTTGTACCCTTCAATTTCCTCAGGGAAATATAGGTAAAGTGTGCC BLAST |
Tissue | flowers |
Gene name | LI_gene_62114; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_84132
Blastp | Homeobox-leucine zipper protein ATHB-7 from Arabidopsis with 57.36% of identity |
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Blastx | Homeobox-leucine zipper protein ATHB-7 from Arabidopsis with 73.26% of identity |
Eggnog | homeobox-leucine zipper protein(ENOG410Z2UE) |
Kegg | Link to kegg annotations (AT2G46680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433935.1) |
Pfam | Homeobox domain (PF00046.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |