| Id Trinity | FTRINITY_DN56675_c4_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_84554 |
| Sequence | AATGCTTCTTTTTCTGCTGGTTATCTTAAAATTCTGTTTGTCTCAAATTTGAATCAAGGCAGCATTATATGAGACTGAATTCCGGCCAGTTCCTTTAGAA GAATATATAAAAGTTGGGAATTGCATTTATAACAAGAGTATGGAGCTCACTAGAACAATATCAAAAGCAACTGACCTTGGTGGTAAAGATCCAGATCACG TTGTTGAACTATGTAATGAAGTTGTTCAAGAGGGACAGTCTGTGTTAATATTTTGCTCTAGCCGAAAGGGTTGCGAATCAACCGCAAGACATGTTGCAAA GTTCCTTAAAAGCTTTATTCCTGATGTTCTTGAGAAAGATTGTGAGTTTGCTGATATTAATGCTGCCATTGATTCCTTGAGAAAGGCCCCTGCTGGGTTG GACCCCATATTAGAGGAAACCCTTCCTTCTGGTGTTGCATTTCACCATGCTGGCCTTACGGTTGAGGAACGAGAGATTATTGAGACCTGTTATCGAAAAG GCCTTTTACGTGTCTTAACTGCCACATCGACCTTAGCAGCTGGGGTTAATCTGCCTGCTAGGAGGGTGATTTTTCGCCAACCTAGAATTGGTCGTGATTT TATAGATGGTACAAGGTACAAGCAGATGGCTGGTCGTGCTGGACGAACTGGAATTGATACAAAAGGAGAAAGTGTACTTATCTGTAAACCAGAAGAGATT AAAAAAGTTACAGGACTTCTTAATGGAAGCTGTTCACCATTGCATTCCTGTTTATCTGAAGATATGAATGGAATGATTCATGCAATCTTAGAAGTTGTGG CTGGAGGAATAGTTCAAACTGCAAGTGATATTCATCGGTATGTTAGATGTACTCTTTTGAACTCCACAAAACCATTTGAAGAAGTGGTGAAATCTGCACA AGAATCCCTTAAATGGTTATGCCAAAGAAAATTTCTTGAATGGAATGAAGACACTAAACTCTACAGTACCACACCTCTAGGGCGTGCATCTTTTGGAAGC TCTCTCTGTCCAGAAGAATCACTTATTGTGCTAGCTGATATTTCAAGGGCAAGGGAAGGATTTGTCCTTGCATCTGACTTGCATATAGTTTATTTGGTGA CACCAATCAACGTTGATGTTGAGCCAGATTGGGAATTGTACTATGAGCGTTTCGTGAAATTGTCTCCTCTTGACCAGTCAGTTGGGAACCGAGTAGGTGT TACAGAACCATTCTTGATGCGTATGGCACATGGAGCACCGGTACGAGGTTCAAACAAGTCAAGAGATAATACAAGATGGTTGCACAATACAAGAGGAAAT CAACTTGGGATCTCCAGTGGAACAAGTAACTCGGATGATCACACACTTCGTGTCTGTAGAAGATTCTATGTTGCTCTCATTTTGTCTCTACTAGTTCAGG AAGCTCCTGTGGGTGAGGTCTGTGAAGCATTTAAAGTTGCAAGAGGAATGGTTCAAGCCTTGCAAGAGAATGCTGGAAGGTTTGCATCTATGGTTGCAGT GTTTTGTGAGAGGCTTGGATGGCATGATCTTGAAGGCATAGTTGCTAAGTTTCAAAATCGTGTATCATTTGGGGTTAGAGCAGAGGTTGTTGAACTTACC ACCATTCCCTTTGTTAAAGGTTCTCGAGCCAGAGCACTCTATAAAGCAGGTTTACGTACACCTCTTGCAATTGCCGAAGCATCCATTCCTGAGATAGTAA AAGCACTTTTCGAATCTTCATCATGGGCCACAGATGAAGGTTCTGCCCGGAGGATCTCACAATTTAGTGTAGCCAAGAAAATAAAGAATGGTGCTCGGAA GATTGTTCTTGACAAAGCTGAAGAGGCAAGGGTTGCTGCTTTCTCAGCCTTCAAGTCACTTGGATACAGTGTCCCACAGTTTGCTCCACCCATATTATCT GCTGCTGCAAGTGATTCTATCAGGAAAGAAGCTGGAAGTCCCTCTGGAAGTGACACAGCTGATACTAGTCATAGCGCCGTTGCTGCAGACCACATCAATA ATTCTAATAAAGTTCCTTTAGTAAAAGAAAGAGATGACTTAGTAAAATCACCTGACAATGCTCCCCTGGCTCCTGTAGATGGAAAATTAGGCAGTGAGAT GCCATATAGCTTTTCTACCGAAAAGTCTGCAGTTCCAGTTGTAGGACCTACGAGGAATGAGTTAAAGGCTACTTTTAACCTTACAAGAAATTCAGATATG ACCACTGTTTCTATCCAGTTACAGAAAACAAATGATAAAACAAGTATACTTGACGGGTGTCATGCTCGTGGTATAGAAGAACATCAGAGTGGAAATTTGG CCAGTGGTAATGGGGTTAGTTCCAGTCAGAGAGGTCCCATTAATGCAGTTAGTAGTCTTGGTGGGCTTGATCAATTTTTGGATCTATGGGATACTATTTC GGAGTTCTACTTTGACATCCACTACATCAAACGCATGGAACTGCACTCTGCTGCCCCATTCGAAATACATGGCATGGCCATCTGTTGGGAAGGCTCTCCT GTGTACTACATTAATCTTCCCAGGGATATTCTATTGTCTGACAATAGAAAAGATGGCTGCTTACCCTTGAGTGGACACAGTCCTAAGCTGAAAGTTTCAT CTTCAAATTCTAAGGAGGCTTTGGAGATTGCTATGCATAGATGGAGCAGGATTAGTAAAATATTAGGGAACAAAAATGTCAGAAAGTTTGCCTGGAATTT GAAGATTCAGATTCAGGTGCTGAAAAAACCCGCTGTTTCAGTTCAGAGATTTGGTTGCCTGGACAATCTTGGAGATACAGTGGACCTTGAAATTGTAGAC AATTCATACGTATTATTGCCCCATATCCATGTTAAAGATGCAATTGACATGTGCGTCGTGGCTTGGATTCTGTGGCCTGATGAAGAGAGTAGCTCCAAAC CTAACCTGGATAAGGAGGTAAAGAAGAGGTTATCAGCTGAGGATGCTGCAACAGCTACTCAAAGTGGCAGGTGGAGGAATCAGATGCGAAAAGCTGCTCA TAATGGTTGCTGCCGTCGGGTTGCTCAAACACGTGCATTATGCTCTGTTCTCTGGAAACTACTTGTTTCTGAGAAACTTGTCGAAGTGCTTATGGGAATC GAAATCCCATTGTTGAATGTTCTTGCTGACATGGAGCTTTGGGGAATTGGTGTTGACTTGGAGAGATGCATCCAGGCTCGTAAATTGTTGGTAAAAAGGC TAAGGTATCTTGAGAATGAAGCTTATAAACTGGCTGGGATAAAATTTTCATTGAGTATGCCAGCAGATATTGCCAAGGTGCTATTTGAACACTTGAAGCT GCCCATACCTGATGGTCGAAATAAGGGAAAACAACATCCAAGTACCGACAAGCACTGTTTGGATGCACTGAGGCATGAACATCCTATTGTTCCAGTCATT AAAGAGCATAGAACACTGGCAAAGCTCTTGAATGCTACGCTAGGATCAATTTGTTCTCTGGCTAGGCTATCTGTAAGCACACAGAAGTACACATTACATG GTCACTGGCTCCAAACATCGACAGCAACTGGTCGGCTTTCAATGGAGGAACCTAATCTTCAGTGTGTTGAACATGCCGTGGAGTTCAAAATGAACGAGGA TAAAAATGGAGGTGACACTGATGACAGTTGTTGTACAATTAATGCTCGTGATTTCTTTGTTCCCACTCAGGACAACTGGTTGCTGTTAACAGCAGATTAT TCTCAGATAGAATTGAGGTTGATGGCACACTTCTCTAAAGACCCTTCACTTATTGAACTTCTCAGTAAGCCTGATGGTGATGTCTTTACAATGATCGCAT CGAGATGGATTGGGTGTCCCGAGGCTTCTGTCGGTTCTCATGATAGAGATCTGACCAAAAAGATGGTGTATGGCATTCTTTATGGTATGGGTCCCAATAG CCTTGCAGAACAACTTGATTGCACTTCTGATGAAGCTGCAGAAAAGATTCGTAACTTCAAAAGAACTTTTCCCGGTGTCGCTTCCTGGCTTCTGGAAGCT GTTGCGTCGTGTCGTAACAAAGGTTACGTGGAGACCCTTAAGGGAAGAAAACGATTTCTGTCAAAAATAAAACTTGGCAACAGTACAGAAAAATCAAAAG CTCAGAGGCAAGCTGTGAATTCCATTTGTCAGGGATCTGCAGCTGACATAATCAAGATTGCAATGTTACGAATTTACTCCGTAATTGTAACTGGAGTCGA TAGCACGGATTCCGATTCCTCAGTAGCAACTAAGTTCAGCATGCTTAAAGATCATTGCCGGATTCTGTTACAGGTACATGATGAACTAGTGCTGGAAGTT CATCCTTCTATGATAAAGGAAGCTGCCATGTTATTACAGACATGCATGGAGACAGCAATCTCACTCCTTGTTCCTCTCCAAGTGAAACTTAAGGTTGGAA GAACATGGGGATCTTTGGACTCATATACACCTGAGATAATGTTAAAATATGCTGCTCAAATCAATGAACCTTGAAGCACAAAGACCACTGTTTTTCAAAG TAAATCACCCTTAATTGTGGAGATTTGGAAGATCTGAGAATGCAGTAGGAAAGAATTTTGGTAATGAAGCTTTCACTGTGTAATCTTGGACTCTCCTCAA CTGAGATAAAGGCAAAATTAGTTGGAGTGTTTAGCAAGTAATAATACTGATATTCATTAAAATCATTTTTTATGTATAGGAATTGGAAAATAAGTTTTCT TTTTACATAGAAATGTATATATACTCAATGAGAATAAAGTATTTCCTTATATGAGGAGATAAATTATCTCATTAAATTCATTCACTGATTGACATGTGTC TGATTTCTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_62153; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_84554
| Blastp | Helicase and polymerase-containing protein TEBICHI from Arabidopsis with 65.3% of identity |
|---|---|
| Blastx | Helicase and polymerase-containing protein TEBICHI from Arabidopsis with 65.58% of identity |
| Eggnog | DNA polymerase(COG0749) |
| Kegg | Link to kegg annotations (AT4G32700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447493.1) |
| Pfam | Helicase conserved C-terminal domain (PF00271.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |