Ll_transcript_84779

• Id Trinity: FTRINITY_DN56682_c3_g1_i14
• Name Transcript: Ll_transcript_84779
• Sequence: ACCTTCATCCTTTTTCTCTCTCAATTCGCCTTTACTCTCTTTATCACATTCTTCCTCTTCAGGTTTCTGCTACTTTCTTTTCTCTTCACTTTTATTCTCT ATTTTGCTCCAAACTTTTTTCCTCTTCATTCATGTTCTTACTCTTATGTCTATTGCCTGTGATTTTATCTTTTCCTTCATTAATTTTCTATTAATTTGTT TGTTTGTGATGTTAATTGTAGACCCTTTAATATAAATACCTCATTTTTATTTTCCATAATAGATTACTTGCTGACTTGTCACTTTTCATTCTTAAATTTT CACAAGGGCTCAGCATAGATAAGTTTTTTTATATAATTAATTTTCTGGGTTTGCTTTAAATAATTAGTCTTTGGATAAAACAAACATTGTTTGATTCATC TGCAAAAGGTTTGGTTGTTGTTGGATTTTATAGGTTGGTTTGCATGGCAACCACTTAGTATCATGAACTATTTTACCCAAAGTTCTGTCTGCGAGTTGGG TTTTGGAGGGAAATGAATAAAAAAAGTAAGGCTTGTGAGCCATAAAATACATTTGTGAAATGACTCTAAAGTCTCTCATTTCATTTTATTCCCCTTCAAA CCTCAACTCGCAAATATGCCCTAAAAGATTAAGGTGTTAGGTGAAGACGTTCATTAAGCTGTTAAGTGGAGACTTAACAGATTTATGTTGTATAGATCCG AAAAAAAGTTTAATGTTGGTTGTCGATTGCCTAACACAGTCTTCATTTTTCATCCTAGCTTAGGAAACCGCTGACCACGATGTAATAACAAATTGTGTTA TAACTACAATGGTATTTATTCAATATTTATTTTCCTGCTATACTATTCACTGACTTAATCAGCGTTTACAACAGAATTCTTGAAGAGCCAATATTTAGGA TTCTCTTGTTGATGCAGATGGCAGCATCATCAGCATGTCTTGTTGGGAATGCTTTATCTACTCCTAATAACAGAAAAACTTTCGGCAAGGACTTAAATCG CAGATATCTCTTCTCATCATTGAGACGTTCTTCATCGAATAAGGGATCGAACTCAAAAGCAGTATTCATAAAGGCTTCCTTGGACCAAAGTCAGGATGAA GGGAGAAGGGGGTTTATGAAATTGTTGCTTGGAAGTGCAGGAGTTAGCTTACCTGCATTGTTGGGAAGTGGAAGCAAAGCTTATGCAGCTGATGAACAAG GTGTTTCCTCTTCCAGAATGTCTTACTCCAGATTTCTCGAATATTTGGACAAGGATAGAGTTAACAAAGTGGATCTGTATGAGAATGGAACCATAGCTAT TGTCGAAGCTGTTTCTCCCGAGTTAGGTAATAGGCTCCAGCGTGTTCGAGTTCAACTTCCTGGACTTAACCAAGAGCTCCTTCAGAAATTCAGGGAAAAA AACATTGACTTTGCAGCTCATAATGCTCAAGAAGATTCAGGTTCTCTTCTATTTAACCTTATTGGGAATCTAGCTTTCCCTCTACTCTTGATTGGAGGAT TGTTCCTCCTCTCAAGACGACCCGGTGGGATGGGAGGTCCCGGTGGACCTGGATTTCCTCTTACTTTTGGTCAGTCTAAAGCCAAGTTTCAAATGGAACC AAGTACTGGAGTGACATTTGATGATGTTGCTGGGGTGGATGAAGCCAAGCAGGATTTCATGGAGGTGGTTGAGTTTCTGAAGAAGCCTGAAAGGTTCACT GCTGTTGGAGCTCGTATACCAAAAGGAGTTCTTCTTGTTGGTCCTCCAGGAACAGGGAAGACACTGTTAGCCAAGGCTATTGCTGGTGAAGCTGGTGTTC CATTTTTCTCAATCTCCGGTTCTGAGTTTGTTGAGATGTTTGTCGGTGTTGGTGCTTCTCGAGTACGTGATTTGTTCAAGAAGGCCAAAGAGAATGCCCC ATGCATTGTTTTTGTTGATGAAATTGATGCTGTTGGAAGACAAAGAGGGACTGGAATTGGAGGAGGGAATGATGAAAGAGAACAGACCCTCAACCAACTT TTGACAGAAATGGATGGGTTTGAGGGTAATACTGGTATCATTGTTGTTGCAGCAACTAACAGAGCTGACATTCTTGACTCTGCCTTATTGAGACCGGGTC GGTTTGACAGACAGGTAACAGTTGATGTTCCAGATGTAAGGGGAAGGACTGAAATCCTAAAGGTTCATGGTAGCAACAAAAAGTTTGATGCTGATGTTTC TCTTGAAGTAGTTGCAATGAGAACACCTGGTTTTAGTGGAGCTGATCTTGCAAATCTTCTGAACGAGGCTGCTATATTAGCTGGTCGACGTGGAAAGACA GCAATCTCATCTAAAGAAGTTGATGATTCTATCGATAGGATTGTGGCTGGAATGGAAGGAACAGTAATGACAGATGGGAAGAGCAAAAGCTTAGTGGCAT ATCATGAAGTTGGGCATGCCATTTGTGGAACTTTGACTCCTGGTCATGATGCGGTACAAAAGGTAACACTAGTTCCCCGTGGTCAAGCTCGGGGTCTTAC ATGGTTCATTCCTTCTGATGACCCAACTCTGATCTCCAAACAACAACTCTTTGCAAGAATTGTTGGAGGGCTAGGTGGTAGAGCTGCGGAGGAAATTATT TTTGGTGAACCAGAGGTTACAACTGGAGCAGCTGGTGATTTGCAGCAAATTACCGGTTTGGCAAAACAGATGGTAGTTACATTTGGAATGTCTGATATTG GTCCATGGTCACTTATGGACGCATCACAAAGTGGGGATGTTATCATGAGAATGATGGCAAGGAACTCAATGTCAGAAAAGCTTGCGGAAGACATTGACGC AGCAGTCAAGAGACTCTCCGACGAAGCATATGAAATTGCATTGACCCACATAAGGAACAACCGCGAGGCAATTGACAAGATTGTGGAAATCCTTGTGGAG AAGGAGACATTGACCGGAGATGAATTCCGTGCTCTACTGTCTGAGTTTGTTGAAATCCCAACTGAAAACAGGGTCCCTCCTTCAACTCCAGTACCAGCCA CTGTTTGAATAGCCCAGATATAATATCTGTAATATGTATATCTCAGAATACCTCTACGGTATGTTTGTGAATGATAAAACTCCTAGTTCACTTCTTTACT CGTGTAGTGTTGTTGACAATAGAGTATGTGCCAAAGAGCAAATGTTTGTGTGTAAAAATTCAAAGCTTCTTTACACCTATATATAATACAGTGTAACTTT TCTGATTAATTCCTGGTGTATCATTATAACTAGTGAGATGCAATGTCTAATATGAGTGCAAATTCTTTGTATTTGTGAAGTCTGGTTTTTTGACACCAAT GTAAAGGATGGTAAATCTGGTTGGGTATCAAATTTTTGAGATGGGTTTTATCAGCAAGATGGTATATCAAGTACTGAAGGAGACAGAAATGGACTTGATT GTAGCAATGGATGGCTAAGAGGAATTGCTGCAATCAAAGTTTGCTTATTATAATAAATAATTAAATTTAAGGATTTCATTGAGGGGGCTATTATCACACA TGAAAAGTTTGTAGTTTACTGTGAGAGACACTAGCAGGTTTCACAATTTGGAAAGTGGTACAGGATTATTGGTAATAGTTGTACTTTGTTCTCCATTTCA TGATATATATATATATATATATATATATGGAAAATTTACATTTTTGGGGTAGTTTGACCGGG
• Tissue: flowers
• Gene name: LI_gene_62246;
• Additional information: details;

Expression of Ll_transcript_84779

FPKM

• FPAB: 0.1
• FPNAB: 8
• LF1: 60.3
• LF2: 121.7
• LF3: 10.8
• LF4: 69.7
• UF1: 45.5
• UF2: 71.8
• UF3: 111.7
• UF4: 132.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_84779

• Blastp: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic from Arabidopsis with 83.91% of identity
• Blastx: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic from Oryza sativa with 88.3% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (AT2G30950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463650.1)
• Pfam: FtsH Extracellular (PF06480.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;