| Id Trinity | FTRINITY_DN56711_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_189963 |
| Sequence | AGACAACACAAAACAAATACTTTTGTCCATTGTGGTTCAACACTATCAATCCCTTTCATCAAATCGTGTAAACTTTATATAGCGTACCAAACACTGTTCA TTGCTGAAACTCATTTCACTTCTCTCTCTCTGCAAAACTAAGAGAGAATAATGAGTGAAACTGAAAAAATGGAGCAAATTCAAAAGCTAATAGGAACAAT TTCACAACCTCACCCTTCACGAATTCCCATTCTCAATCTATTCAACCTTTACTTGGGTAGACATAGCCTCCAGAAACGTGATGATTTAATCAGGGAACCC CCGAACAAAGCCCAAAAACGTGTGCTTGCTCTTAACCGAGAGCTCCCTCCACCAAATGAGCAGTTTCTTCAAGATTTTATGCAACTCAAGAACCAGTTTC CCTTTTACTTTCAGGACCAAGATCAGTTACGTTCCGTGACCGAGTCTATTCTCATATTTCTAGTCATGCAGTGTAGTAGTCATGGAATACGGGCAGAGTT TCTTCTTTATGCTATTCGAAGTTTGTGCAGTGCTGAGTACATTAACTGGGAGACTTTCTTGCCATCTCTCCTTTCTTCAGTTTCTTCGGCAGAGTTTCCT GTTGATCAAGGGAATCAGTTGATGCCAACTGTTTATTCTAATTTTCAGCCTTCAAATTCTGCTTCTCAATTACCTTCAGTTCATCCTATGGGCTACCCTG CACGATCAACTAGTGAACCATTATCTTCTGCAGCTTTATCTCCAGTCAAATCACCTGATACTTCCTGCACTGGACAACATTCTCAATTGAAAGTGCCATC TATTAGAAATAATGACATCAGCAGCCTTCGTCAGCTATGTTGCAAGATTATTTTAATCGGGCTGGAGTTTGATCTAAAACCCATGGTTTATTCTGCAATA TTGAACCATATGCTGAATTGGTTGGTGAACTGGGACCAGAGGCAACAGGGAATTAACGAGCCCGATGCACCAAAATCATTTAGACCTGACAAAGCCATAA TAGGTTGGATGCACAGTTGTTTGGATGTGATCTGGCTTTTAGTCGACGGGGGAAAATGCCGAGTGCCCTTTTATGAATTATTACATAGCGATTTGCAATT CATGGACAATATTCCTAATGATGAAGCAATATTTACACTTATCTTGGAGATCCACAGGAGACGAGATATGATGGCCATGAACATGCAAATGTTAGATCAG CATCTTCATTGCCCTACATTTGGGACGCATCGGATCTTGACTCAAGCAATGCCAAATGTTTCAGCAGAAGCAGTAGCACATCTGCGGCTAACGCCAATCA CATATTTAAGTGTACTTGGAGAACCACTGAATGGAGAGGATATTGCATCTTCTATCCAGAAGGGAAGTTTGGATTGGGAGAGAGCTTTACGCTGTATAAG GCATGCTATCCGCACTACACCGTCACCTGATTGGTGGAGACGTGTGCTGTTACTAGCTCCTTGCTACAGGCCTTCATCTCAAGGGCTTTCCCCTGGTGCT GTTTTTTCTTCAGAAATGATCTGTGAGGCAACTATTGATCGAGTTGTTGAACTGTTGATACTGACAAATTCAGAGATAAATTGCTGGCAGGACTGGCTTG TCTTCTCTGATATATTCTTCTTTCTTATAAAAAATGGGTGCATTGATTTTGTTGATTTTGTGGATAAGCTGGTGTCACGTCTTACACAGGGTGATCAACA TATTCTTAAGACCAATCATGTGACTTGGCTGTTTGCACAGATAATGCGAGTCGAGCTGGTTATGAACGCTTTGAATTCAGATGCTAGAAAGATGGAGACA ACCAGAAAGATTTTATCATTTCATAGAGAAGAGAGAAATTCTGATTCTACTAGCCCTCAAAGCATCTTGCTCGATTTTGTAAGCAGCTGTCAATCTTTAT GTATTTGGTCTTTGAATTCATCAACCAGAGAATTTGTGAACAATGAGCTGCGGCAGAAAGGAAAACTAATAGATGAATGGTGGAAACAAGTCAGCAAAGG GGATCGCATGATGGATTATATGAATATGGATAAACGCTCATTAGGGATGTTTTGGGTTTTGTCGTACACAATGACACAACCTGCTTGCGAAACAATATTG AAATGGTTAACTTCTGCTGGAGTTATCGACTTATTACCGGGAACAAACCTTCAGCCAACTGAGAGATTAGTGGCTACACGAGAAGTGAGCCCATTGCCCA TGTCATTGTTATCTGGAATGTCGATGGGCTCATGTATGAAACTGTCTTTACAACTGGAAGAATCTCTGTTTTCGGGGCAGGTTGTACCCAGCATAGCAAT GGTTGAAACATATAGTAGAGTGTTGCTCATTTCACCCCATTCTCTATTTCGTTCACATTTCAGTCATTTAGCACAAAAGAATCCTTCTTTGTTGAGCAAG CCTGGAGTAAGACTTTTGGTGCTTGAGATATTGAACTACCGATTACTTCCGCTTTACAGGTATGAGGGAAAAACCAAATCCTTGATGTATGATGTTACAA AGATTATTTCTGCTCTAAAAGGAAAAAGAGGAGATCATCGAGTATTCAGATTAGCTGAAAATCTGTGTCTGAATCTCATTTTCTCATTGAGAGATTTCTT CATGATTAAAAGGGAAGGGAAGGGACCAACTGAGTTTACAGAAACCTTGAATCGAGTAACTGTTATAACACTTGCTATCCTTATTAAAACATGTGGGATT GCAAATGTTGAACACATGCTTTATCTCCGAACTATGTTAGAACAAATATTGTCAACCAGCACACATACATGGTCAGAAAAAACACTACGCTACTTTCCTT CAGTTCTGCGTGAAGCGTTGGGCGGTCTTCTAATAGATAAAAGAAGCCTTGCAATACAAGCATGGCAGCAGTTATAAACCAGAAAGGTGTGCCTAATCAG TGCCTTAACCAGTAAGAGGCACCTACCCCATTTACAACATGCTTTTAACTGAGCCAAAGGTGTACTTATGTTTGTGGTGATGTTAGTCATTACATAAATG TCATGGTTAAAGGCAAAGCTGAAGTACATAAGGAATCAGTGTGTGAAAGAAGTGATTGGTTTGAAGCAGTGAGGATTTGAAGAATATGTATTAATCTTTC TCACGGCGAAAAACAAATGAATGGTGCTGCTCCAAGCTTGAAGTCTAAATGGATTTTACATGGCAGAGCATCTTAGAGATATTAACCCTTATGGGCTGAC ACCTAGGAGCTTAACTTACTAGGAGAGTGGTTTCTGGACATAGACCATTGCATTAATATATACATTTAGATTTGAATGTCTATTGTGTACAAACTTTACT GAATTAAGCATGGCATGGACTGCACTATTATCACATACATTTTAACTTTAGAGCTACATGGTTACAACTGTTTCTACTTTGTATATATGAGATAATTAGA TAAAGTTTGTATGCAATGGCAATAACTGGATAGCAATGTTTAAGTTCTATCAAACTATGTTAGAGGGACAAGATGTAGTAAATACATTAATAAAAATTTG TTATTTTTATGTGCTAACTTTTTCTAAGCATTTAAATTAATTCTGAAGAGATTTGTGCAGGCAGAAACCATTGTTTTACACCAGTGCACTCAGATTCTTT CATCATCAGCTGATGCTAGTTATGTGACAACCTATATTGGTCATAGTTTCCCTCAGCATCGACAATATTTGTGCGCTGGTGCATGGATATTAATGCATGG CCATGCTGAAACGATTAACGGTGGAAACCTGGGGCGTGTGCTGGGGGAATTTTCTCCTGAAGAGGTGACATCTAACATTTATACAATGGTGGATGTTTTG CTTCATCATATGCAAATGCAGCTCCAACAAGGACATGCCTTACAGGACCTTCTATTGAAAGCTTGTGCAAGCCTTGGCTTTTTTGTTTGGACGAATGAGC TACTTCCTTTGGATATCTTGCTTCTAGCACTTATTGATCGTGATGACGATCCGCATGCCTTGCGTATTGTGATTACTCTTCTTGATAGGCAAGAGCTTCA GCAAAGAGTAAAACACTTTTGTATGACACGTGGGCACCATGAACATTGGCTTTATTCTGGCATATTCAAGCGCGTTGATCCATCAAAGGCTCTTGGAAAT TACCTCTCATGGAAGGATAGGTATCCAGTGTTCTTTGATGATATTGCAGCACGCTTGCTTCCGGTCATCCCCTTAATTATTTATAGACTTATTGAAAATG ATGCTATGGAGCCAGCAGACAGAATACTGGCCTTGTATTCTTCACTTCTTGCTTATTACCCTCTAAGATTTTCCTTTGTTCGTGATATACTTTCATACTT CTATGGTCATCTTCCTGGAAAGCTGATTGTTCGAATACTCCAAGTACTTGATATCAATAAGATTCCCTTCTCAGTGTCGTTCCCACAGCAAATAAGTTCA TCAAATCCCGTCACATGCCCTCCTCTGGATTATTTTGCGACATTATTATTGGGAATAGTGAATAATGTTATTCCTCCATTACATGATTCAAAATCTGGAT CAGTGGAAGGTGCTTCAAACAATGCACTGCGTACTCCACCTAACAAGCCTCCAGCTGTATCTCAGCCCGAATCAGAAAATGCTCCTGAGGGCAAGAAGGC GTTCTACCAAATTCAGGATCCCGGAACATATACTCAGCTAGTTCTTGAGACTGCGGTCGTCGAAATACTTTCCCTTCCTGTATCTGCCTCTCAGATAGTA CATTCACTTGTTCAAATTATTCTTAATATACAACCAATGCTGATCCAGTCCAGCAATGGTATCCATGGTGGTTTAAATGGTGCCGGACAAGGTTCAGTAT TTTCGACATCGCCCTCCGGAGGAAGCTCAGATTCCTTGGGTGCAAGCAGATCAACTCCTTCAGTTTCCGGAATAAATACCTCTAACTTTGCTTCACAAAG TGGTTATACATGCCAACAATTGTCTTGCTTGTTGATTCAAGCTTGTGGACTCCTGCTGTCTCAGCTTCCTTCTGATTTTCACTTTCAATTTTACTTGGAG ACGGCACGAATTATAAAAGAGAACTGGTGGATTGCAGATGGGAAAAGGTCACTTGGAGAAATAGACTCTGCTGTTGGCTATGCTTTGTTAGATCCAACTT CGGCTGCAGAGAACAATACCTCAACACCAATTGGGAATGTGGTTGCCTTGCTTCATTCTTTCTTCAGTAACCTCCCACTAGAATGGTTAGAAAGGACCCA TGTTGTCATCAAGCAACTTCAGCCAGTAACATCAGTCGCAATGTTGAGAATAGCATTCCGTATAATGGGTCCACTCCTTCCAAAACTTCTGGGTGCTCAT GCACTTTTCAACAAGACCCTTTCATTACTATTAAGTACACTAGTGGATGTATTTGGAACAAACTCTCAGCATTCAACTGCTGTTGAAGCATCAGAAATAA CTGATCTCATTGACTTCATCCATCATGTCGTCCATTACGAAGGGCAGGGAGGTCCTGTGCAAGCTAGCAGCAAACCTCGACCGGAAGTTTTGGCTCTTAT CGAAAGCTCATCTGAGAATCTACGTCCAGACATTCGGCATCTGATGCTACACCTGAAGACTGATGTAAATTCTTCTATTTACGCGGCTATGTCTCATCCA AAGTAAGTGCCAGATTATAGTCCGAGCCTATGAAGCACAGACACTTCAAATGAACATGTATCCATATCCGACATCGCATGAATACTTTTGGTAGCTCCTA ATTGTATTTGTTAATTTTTTAAATTTTTATACCATCATAGACAAAAATATCAAAATAAGTAGATAACTATTAGCATTTTATTATATTCCAAATTATTTAC ACTATTAAAACATTATTCCTCACTTCTAGTGTAAGATTTGTGCTTTTATCCTAACTTTATATTAATTTCATATCTTGTATCATAATTATATCGTGTACAA TAATTTTAAAATATTCCATGTACTTGTGTATCGTGTCTTATACTATCTTTGTCATGTGTTGTATTATTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_62507; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_189963
| Blastp | Mediator of RNA polymerase II transcription subunit 23 from Arabidopsis with 64.68% of identity |
|---|---|
| Blastx | Mediator of RNA polymerase II transcription subunit 23 from Arabidopsis with 63.4% of identity |
| Eggnog | Mediator complex subunit 23(ENOG410ZH5R) |
| Kegg | Link to kegg annotations (AT1G23230) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424086.1) |
| Pfam | Mediator complex subunit 23 (PF11573.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |