| Id Trinity | FTRINITY_DN56713_c0_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_190187 |
| Sequence | CAAAAAAGGTACTATTTTCACTCTCATTCTTTGTTCTTCAGCAATCCCAATACTTTTTGATAATTGAAGAAATGGGTTTCTATTAATTCATTCATATTTT CTTACCTTTTGATAATTAACAAATTCTCAGAGGAGTTGTTACAAAAATTGAGTGTGAAGTAAATAAATTTTATTACCCATTAAAGCCCTGCACTTCATTT CTCAAAAAGGTAGTTTCTTTGTGATCTTCCTGCACCACGTGTGGTACTGGTACTGTTCCCTTTAATGTTTCAATTCAAAGCATTACTTTTTTGGGTGGCT TCACTATTAAGTTCAAAATTGGAGGTAGATGGGGGAAGTAAATTTTAAGCAAAGCCTTACAATGTTAGAATTAACTAACTAATTTCAAAATTTGATTTTT TTTATGTGGGTTTTGATTGGGGTCTCTGTGATTAGTATCATGTTCATACCAATAGAATCTTCATTGCAGTGTAGACTCTCAGATCAAGTTGTTAATTTGT GTTATGTGATGAATGATGTTGTAGACAGAGTCATGATTTTGCTGCTTATAAACTATATTGTAGATGGACCGAAGGAATTGGCTGTGGCGCAGGAAATCAT CCGAAAGAAGTCCGGGTGAAACTGAGAGTACTGGATCAGTATCATCCCTTTCCGAAAGGTTATCTGATGATCAGGTATATCCAATCCAAGCTGCTCTATC ACCAGAAGTCACATCTAAGGTTGCACTGAATGAAGAACCTGTTGCTGATGTGAAGATTCTAACAGACAAATTAGCAGCTGCTATACGAAATATCAGAGCC AAAGAAGACTTGGTAAAGCAGCATTCAAAATTTGCTGAAGAAGCTGTCACTGGCTGGGAGAAAGCTGAAAATGAAGTGTCAGCTTTAAGACAGCAACTTG ATGCTGCAAAGCAGAAGAACTCAATTCTCGAGGAACGAGTTGCTCATTTCGACGGGGCACTCAAAGAGTGCATGAGGCAGCTTCGACAAGCTAGAGAAGA CCAAGAGCAAAAGATTCATGAAGCTGTTGCAAATAATTCTCATGACTGGGAATCCAAAAAATCTGAGCTTGACAGTAAAATTGCTGTGCTTGAGGCCCAA CTTCAAACAGCTAAAGCAGATCCTGCTGCACCAGTGCTTTCTGGTCTTCACAAGAGACTTGAGGATATCGAGAAAGAGAATTCAGTTCTTAAACTTGAGC TACAATCTCGACTTGAAGAAGTAGAATTCAGGATCGCTGAGAGGGACTTGAGTGCCCAAGCTGCTGAAACAGCAAGCAAACAGCATTTGGAGAGCATCAA GAAGGTTGCTAAGCTTGAAGCTGAGTGCCGTAGACTGAAAGCCTTAACTCGCAAACCATTCTCCGTTAGTGATCAGAGGTCTTTGGCTGCCTCTTCGGTT TATGTTGAATCCTTCACAGATAGCATGTCAGATAGCGGAGAGAGGCTATTGGCAGTTGAGAGTGATATGCGTAAATTAGTTGGCTGGGAGATGAATGAAT GTGAGCCGAGCCGTTCTGACTCATGGACATCTGCTTTAGTTACAGAACCTGGTCAATTTAAGAATGAAAAGTCTACTGGAAAAAATCATGTCGTCCCTGC AACTGAGATCAGTCTCATGGATGATTTCGTTGAGATGGAAAGGCTTGCTGCATTGCAAGACACAGAAAAAGGAAGCAATTTTGTTGGAGCAGGAGTATCA TCAGGTCAACTTAATGTTGGCCAGGGTACCATGAAAGATGAAATGGAATCTACGGTTCAAACAAATGCTGAGTTCGGAAAGAAACTGGGGAAAATAGAGG CAGATAAACATGAGGTAGAAATGTGTTTAACCGAGTGTCAAATGCAGCTTGAGGCATCAGAGTGTCGGTTAAGGGAAGCGGATTTGAAGGTTACAAAGCT TGAAACTCAGTTAGCTTTTGCTAATAAATCAAACCAAGAAGCATTTGAAGAAATAAAAGCTACCAATACAATGAAAGAGATAGCTGAGTCAAAACTCAGA TTTACTCAAACTGAGGTAGAAAAATTGATTTCAAAAATCAGTTCATTGGAGAAAGAGATTCAACAGGAGCGGGCTTCATCGGCTGAGATTTTGATCAAAT GCGAGAAGTTGGAGAACGAGCTTTCGTCAATGAAGCGTGAAGCTCAAGTTCAGCAAGATGCAGAGATATTGTGTAGGGAAGGTGTCACAAGCGAGTTGAA GCTTAAGCAGGAGAAGGAACTTGCATTGGCTGCTAGTAAATTTGCCGAGTGCCAGAAAACCATTGCATCTCTTGGACAACGGTTAAAGTCCCTTGCAACC TTTGAAGACTTCTTACATGATTCAGAGAACCCTATGGAGTTAACAAGTGAAGTTACACAAGCTCCTGAAACTAGTGGTGAAGAGTTAAAATTACATAATG ATTTGAGTTTTCCCAAAAAAGATTCCGAGTCTCCAATTTCGGTAAAATCATCTACTACCCATCAGAAAAACCGTAACAATGGTTATGGTAAGGTTGTCCC TAGAAGTAAGAGTGTAAGCATGACAAGAAGACACTGAAATTATTGGAGAGAAGATAAGGTTGAGTTGTAAATTTGGGTTCTTCATTCTTTTCTCCTGGAT TCAACATGTATATGAATCCAAAGTATTTACATAAACAGCATTGCTTGAAGAAGTAAAATTGTTCAAAGCAAGATAGTAATACATAAAGTTCAATTTTTAT GTTGTCCCTTAAGTTATGGTGGACTTGATCCTTATTATTTTGCTTCATTCAATTCAACCACAAGATAAATGCTACATCCCATGTTCAAAGGAAATTTATT TGTACCTCTGTGAATAATCATGAACATATACAAACAAAAGAAAAATAATGGGGTGAGAGAGGCTCGAACTCTCGACCTCAGGATAACTCTTAGCTATGAG ACCTACGCGCTAGCCAACTGCGCCACCACCCCATGTTGTGTTGGATGCAATTGAATATTAATGATTTTGTCCCTCATAAGTTGAAACGTTCTCAATCACC CGCGAGATTAAAGAATGAATGATATAAAATTTTATCGTATTTAATTTTAGCGCAAAGGTTGGAGTATTTGAAGTTGGGAGTAAAATTTGTTATTTGTTGA AAAATTATTGGGCAAAAATTAGACATAGATCATTGGAAGTTCTTATAGTTTTTGAATAGCTACTTTTCAAGAACTACAATCTCCGTTTTCAAAAGTTATA ATATTTCTTCATTTATGGTTCACTAAAAAGCCCCTCGAGCTTATTATTTGAGTAAAAAATCGATAATTATCAAATAAGCTACAAGCTTGTCATGCCAAAC ACACTTAACTTAATATTCGATGTTAGCCATGCATGTTAAATTCTTGATGGGTATTTTATGTCTGTAATGCTGATGTTTTCAACTGGTTAGAGTACATGCT TGGTTTTGGATGGCTTATTAATAGTCCTTTTCAACAAAAGAATACCAACCAGAGTTTTCTTTCTAGTGGCTTGCAGTATAAACACTACCAAATTACATGA TAATGCTGTCTAAGCCACACTACAAACGTCGAAGAGAAATGTTATATAGAACTTTCAGCAATTTGTGCTTATTTATACACCTACTACATTATTTACCTGT TTTTTATGTGCTGTTTTCTATGGTAATTTTTCCTTCAAAGACTGAGTTTTTACTTTGTATATCTTAAGTTGTATGATATACTATTTTATGATGAAACTGT CTAGATAACATTCAGTGTATAGATTATTTCAAATATTCTAGAAATTATTTATCATTTACTACCATCTTTTATAGAAAAGTTACCTATAACGATTGCAGGC TCTGTTGTTCTCTAATAGGGATTTAAAGTCAAATATTTATTTTGTCTCTTGACCAAAATCTTTGTTTTTGGTGAGTTTTCACCTTTCTAGTATGTAATTC TGGTTTAGAACTTATCAGTCTATATCTAACTTTTTAGTTTAAGGGAAACATTTCTAATTCAAGGTGACGGGGTTATGTAAATTTGAACTATGGAGGTTGA TTTTTATGAATATTTTTTCTTTTATGATTTTTTACCACCTTTGTTGTTGTAATTATTATGTTTATATTTGCATTCAAGTTTTGAGTACTAGAAGTTTTCT GATCAAAGTTTCACTCAAGACCTTCATTACCTTTTTAACATAATATAAATGTATTGTTACTAAATACTGAACTCTATTAAGGTAATGATATTTCCATGCC GAGTTCTGGACTGGGAATTAGTCATTTTAGTTCTACCACATTCAGTCATGAAATGTTTTGGTTGGTGTCAGACTAACACAGTCTTAGATTTTGCAACTGC ATGTTCAGTAGTTGTAGCCCTGCTGACCCATTATATAACTCTGTATATATTTGTGAAATTAGCCATTTAGCCTATTATCGGTGGTCGCTGAGCTTACAGA TCAAAGATGATACAAGTTAATGACACAGACACTGAAGTTCTGACCGAACTTTGGTTTAAGAGAATGGCAGATGTATAGGTAGTATAAAATCAAGGATTGC TGTGTTGGAATCTTATACTTCACTTGGTGAACATCTTTTTGCAGACCATTGCAACTGTCTGTATGTTCCTTGCTGGGAAGGTTGAAGAGACTCCTCGTCC ACTAAAGGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_62519; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_190187
| Blastp | Filament-like plant protein from Lycopersicon with 45.32% of identity |
|---|---|
| Blastx | Filament-like plant protein from Lycopersicon with 44.31% of identity |
| Eggnog | filament-like plant protein(ENOG410YAAZ) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464398.1) |
| Pfam | Filament-like plant protein, long coiled-coil (PF05911.10) |
| Rfam | tRNA (RF00005) |
| GO | - |