Id Trinity | FTRINITY_DN56722_c5_g4_i4 |
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Name Transcript | Ll_transcript_188577 |
Sequence | CTGACATCAACATCATAGAAGCATGGTTCTCCCAAACGTTCCTACTTTATTCAGTTCATTTATGAATCGTTGGATCTACAAGGCTAATCATAATGTTGCC ATTGATAGAATCAGTGACTTACCAAGTGAAATCATCAGTAAAAAAATACTGTATTTATTACCCACAAGAGATGTAGTTAGGACCAGTGTTCTCTCAAGGG AATGGAGGTATATGTGGACTATGGTTCCAAGATTTGAGTTCCATGTTTTTTTTAGAATGTGCAAATCTGTTGGATTTGGAGAGAGTGCAATTTTTGGTAT TATGTCACGAATTCTAATGTTACATGATGGTCCAATATACAATGTGACTCTAGAGTTTCCTATGGGTAATTTATTCAGAATGGGATTTATCAATAATTGC CTTAAGTTTTTATCATTGTGTGGAGTTCAAGAGATTATACTTCATAATAGTGAAGAAGGGATTTGTGAAGTGCCATCTAATTTGTTCTCTCTTCAGACAT TGACTTATTGCATGCTCAAACATCTTGAACTATCACTTCCTCCAAATTTTTGTGGCTTTAAATATCTATATCAACTAGAGTTATCTCATATGAAAGTTGA CTCTGGTAAACTTGAGAATCTTATTTCTCTTAGTCCAGTAATTACCTTTATTGTCCTTCAATTTTGTTATGGTTTAGAACATATTAATTTCTCATCCACT ACTCTCACATCTTTATACATACATAACTGTGAGGATATGAAGTCATTTTGTTTCAAGAATTCAAAGAATTTGATTGATTTTTCAATCCAATTTCTTGATC CTTATCCGAAGAACTTAGAGAAACAAAATATCTCCAGTTTGATGAAAGACTTGAAGAATATTAATAGGATTTCACTGGGAGAAGGTTATATTAAGATTTT ATCCTCAAGTATAATTCCGGATACACTGCACTGGTCGATTGACACCTTGAAATATTTGGATTTGTATAATTTAGATTTCAATGAACCAAGGGAACTTTTG CTTATTCTTTGCTTACTTAGAAGTTCTCCTAATCTGTTGGGATTATTTATAAAAGTGAGTAAGATAACACATATTTGTTAGAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_62600; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_188577
Blastp | F-box/FBD/LRR-repeat protein At1g13570 from Arabidopsis with 32.33% of identity |
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Blastx | F-box/FBD/LRR-repeat protein At1g13570 from Arabidopsis with 32.12% of identity |
Eggnog | F-box FBD LRR-repeat protein(ENOG411183N) |
Kegg | Link to kegg annotations (AT1G13570) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019451476.1) |
Pfam | F-box domain (PF00646.32) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |