Ll_transcript_188578

• Id Trinity: FTRINITY_DN56722_c5_g4_i5
• Name Transcript: Ll_transcript_188578
• Sequence: AAAACTCAACTAGAGTTTTGTCTAATTCTTTACCAAAAATTCTCAGAAATTCATTTTCGAAAATACTTTTATTAAAAATATTAATAAAATCTCTTAATTC AAAATTCATAAATTTCGCGGTGTTACATGATACGTTAAAACCCTAGTTAATCTAGGTCTTTTTCTATTACGAGCGGACTGTGAACCCCAACTATCGGCAC CAAAATATGAAAATCAATCAATTAAGAACAAAAATCAATCGAACCTTCTAGAGTGTTCCTTCAATTTCAAAGTGGCAAACTATGTCTGAAGTATGTTCCT TTCAAATTCTTCACAAAATCCTATCAGATAGTCGAAGAAGAGCCTTCAAGATCTCGCCATTATTGAGGAATAGTTGAGAGTAAATGAGAACCTAATTTGA GAAATGAAAAAAAATGGAAGAATATGAAGCTTGGGCGAGGATGAGTCTGTGTGAGGGTTGCAAGAAAATAAAATAAAAAATAATAAACTGATAGGCAACA GTTTAAAACTGTACTCCAAAATTAATAAAAGAGATTATAAAAATAATTGTTGTCTAATGTATCCTAAGACCATGGTTTTAAAACCGTAGTACATAAACGT AAAAAATAGCAAATAAGACAACACTTTTAAAAACGGTGGTTTAATATACCTTACGACCACAGTTTTAAAACCGTAGGGAATAGAAGTGTTGCCATAAGTC AAAAATGTAGTAGTGAAGAAGGATGGTGCACACTAATGTTATTGCTGAGATTTATCGTATGCGGGTTTTGGAAGATCGGGTTACTTCTCTTCCTTTCAAA CCCTTATCTAAAGAATTGCACCCTGACTTAGCTTTGCTACTGCATAATTACAAGGATGTGTTCTCCATACCTATATCTCTTCCACCTCCCAGGTCCCATG ACCACTCTATTCCTTTACTTCAAGGCTCTGACCCTGTGAAAGTTAAGCCTTATAGGTATTCTTACAGCCAGAAAGAAGAGATAGACAGGTTGGTTCATGA AATGTTGCAACAGGGTATTATCCAATCAAGTAAGAACCATTCTTCCTCTCTCATCATCTTAGTGAGAAAGAAGGATGGTCCATGGAGAGTTTGTACTGAT TATAGAGCTCTAAATGCACTCACTATAAAGGATTCTTTCCTAATTCCAACTGTAGATGAGTTATTTGGAGCTTGCTTCTTTTCTAAATTGGATTTGAGAG ATGAATATCATCAAATCTTGTTGAGTCCTGTAGATAGATTTAAGACTGCTTTCAGAACTCACCAAGGTCATTATGAGTGGTTGGTCATGCCATTTGGATT GACCAATGCCCCTGCCACATTCCAAAGTTTGACGAATGACATTTTCAAGGGTTTATTGAGAATATTTGTGTTGGTTTTCTTTGATGACATTCTAGTTTAT AGTTCCTCTTGGAAGGATCATTTGTTTCAATTAGAAATGGTCTTGAAGATATTGCAGAACCATAAGCTCTTTGCCAAGTTCTCCAAGTGCTCTTTTAGAG TTCAACAGATTGAATACTTGGGTCATACAATCTCATTTGAAGGAGTTGCTATGAACACTGTGAAGCTTGAAGCAATACAACAATGGCCCCAACCTACTAA TTTGAAACAGCTTAGAGGTTTTCTTGGCATTTCTAGTTATTACAGGAGATTTGTCAAACATTATTCTACAATTGATACTCTCTTATCTGACTTACTTAAG AAGGATTCTTTCTAATGGTCTAACTCTGCATCAGAGTCTTTCTTACAGCTTAAGCAAGCATTGACCACAACACCAGCTTTAGCTACTCCTAACTTTTAGG CGCCATTCATTCTTGAAACAAATGCTTCTGGTTTTGGCATTGGTGCAGTTCTTAGTCGGGACAATCATCTCATTGCCTTCTTTTAAAAAAATTGTCTCCA AGAATGCAAAGACAATCAGCTTATGTTAGGGAATTGTTTGCCATCATTGAGTCATTAGCCAAATTCTTACATTAATTGCTTGGGCATAAGTTTGTGATTA AAACTGATCAAAAGAGTTTGAAAGAATTGATGCAGCAATCTCTACAAACACCTGAACAACAACAATGGATCCCAAGTTGTTGGGATATGATTTCAATATT CAATATAAACCTGACAAGGACAACATTGCAGTTGATTCCCTATCTAGAAGCCTATTCTTGGCTTTGTCACAACCTATAAACATTTGGCTAGAAGAGTTGA TCAAGTTACAATATGAAAATGTTGAATTAAAAGCTCTGCTCAAGACAGTTTGTAGTGCTTCTACACACAACTCAGATTATACAGTATGGCAAGGTATTCT TTTATTCAAAGGAAGGATCATGATTCTTGATAATTTGGCTTTCAAACTCAAGTTGATGCAAGAGTTTCATGCTTCCAAAACAGGGGAACATGTAGGTATG ACCAAAACTTTAGCATCCCTCACTTATCAGTTTGTGTGGCCAAAAATGCAACATGATATCAGAAAATTTGTAAGATATTGTTCAATTTTCCAACAAGCCA AGATTGAAAATATCACGCCAGATGGACTACTGCAACCTCTACCAATTCCTAATCAGATTTGAGAGGACATGGCCATGGATTTCATTACAACACTACCAAA TTACAACGGCCTAACCAATATACTTGTTATTGTTGATAGACTCTCCAAATTTGGACACTTTATTCCCTTAAGAACTGACTTCACAAGTAAGAGAGTTGCA AGAGCATTTATTCATATCATAGTGAAACTATATGACATTCCCTAGTCCATTGTTTCTGATAGGGTGTTGAATAGAGATTGGTGGTGTGGGTTGTTTTATA TTTTTTTATTCTATACAACACTTTATTTGAAAAGTATTTACAAGTGCTTTGAATCTCTTTGCCTTTAGTTAAGTTATTGAACTCGGTTTTATTCTTTGCT CGCCATCTTGGCTTTGTTGAAATAAATTCCAACGCCGGATTAATGGTTTCAAGAATAGTCCAATTACAACTTAACTACTAATAATCATGTGGATAGTTTG TCATTTCT
• Tissue: flowers
• Gene name: LI_gene_62600;
• Additional information: details;

Expression of Ll_transcript_188578

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0.2
• LF2: 0.6
• LF3: 0.5
• LF4: 0.1
• UF1: 0
• UF2: 0.7
• UF3: 0.3
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_188578

• Blastp: Transposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 40% of identity
• Blastx: Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 38.89% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YGR109W-B)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_014627597.1)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;