Ll_transcript_189046

• Id Trinity: FTRINITY_DN56723_c1_g1_i13
• Name Transcript: Ll_transcript_189046
• Sequence: TTTTTCATCTGTCTCTTGGTATTCAGAAATCAGAATTGTCTTTTATAATAACCAACTATTCAACAGGTTGAATCTGCTTTTGAATTTGCAAGAATATGCC GAAAATTGGACTTCCACAATTTTGTTTTTTCCATGAAAGCGAGTAATCCAGTTGTGATGGTTCAAGCATACCGTTTACTTCTATCTGAAATGTATGTCCA AGGCTGGGATTATCCATTACACTTAGGAGTTACTGAAGCTGGAGAAGGTGAGGATGGACGGATGAAATCCGCAATTGGCATCGGAGCTCTTCTCCAGGAT GGGTTGGGGGACACAATTAGAGTTTCTCTCACAGAACCACCAGAGGAGGAGATAGATCCTTGCAGAAGGTTGGCTAACCTCGGTATGGGAGCATCTAAAC TGGAGAAAGGAGTGGCACCTTTTGAAGAAAAACATAGACGCTACTTTGATTTCCAGCGACGATCTGGTCAATTGCCTGTGCAAAAAGAGGGTGAGGAGGT GGACTACAGAGGCGCCCTGCACCGCGATGGTTCTGTTCTCATGTCAGTCTCATTGGATCAATTAAAGAAGCCAGAGCTCCTCTATAAGTCACTTGCTGCC AAACTCATTGTTGGCATGCCATTCAAGGATCTGGCAACAGTGGATTCGATTTTATTGCGAGAACTCCCTCCAGTCGATGACAACAATGCTCGGCTAGCTC TCAAAAGACTGATAGATATAAGCATGGGGATCATAACTCCTTTATCAGAGCAACTAGCAAAGCCATTACCCAATGCTATGGTTCTTGTAAACCTTAAGGA ACTGTCTACTGGTGCTCACAAATTTTTGCCACAAGGCACGCGCTTGGTTGTGTCAGTACGTGGTGATGAGACTTCTGAAGAACTTGAAATTCTTAAAGAT GTTGATGCTACCATGATTTTCCATGACTTACCTTATGGGGAGGACAAAATTAGCAGAGTACATGCAGCAAGGAGGCTATTTGAATATTTAGCAAACAATT CTCTGAACTTCCCTGTCATTCATCAC
• Tissue: flowers
• Gene name: LI_gene_62607;
• Additional information: details;

Expression of Ll_transcript_189046

FPKM

• FPAB: 21.8
• FPNAB: 13.1
• LF1: 21.9
• LF2: 150.6
• LF3: 269.5
• LF4: 160.1
• UF1: 15.9
• UF2: 143.7
• UF3: 296.8
• UF4: 178.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_189046

• Blastp: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic from Arabidopsis with 85.23% of identity
• Blastx: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic from Arabidopsis with 85.94% of identity
• Eggnog: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity(COG0821)
• Kegg: Link to kegg annotations (AT5G60600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448725.1)
• Pfam: GcpE protein (PF04551.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;