Ll_transcript_189047

Id TrinityFTRINITY_DN56723_c1_g1_i14
Name TranscriptLl_transcript_189047
SequenceTAGAGTGATACAAACTTTGGTACATGTGTCGGACATAAACATTGTACTAAAGCTGGTAGTGACAAACGATAATATTTGTTCAGTGTTGAGGAACACAACA CAAGATCATCATAGGCACACACAATTCTTCTCTTTCATTCTATCAGGTGCTTCAAAAATGGGTGCAAGTGTAAGAGCTATACCAACTTCGTTTTCAACCA TCAACACTTGGGATTACAGTAATGGGTTTGCAAAAAGTATGGATTTTGTGAGAGTTTCTGATATGAACAAAGTGCAATGTGGAAAGACAAAGAGGGTTTT AGTTATCAGGAACTCTTCAAATCCTGCTCAAGATATTGTTCAACTTCAACCTGCATCACCAGGAAGCTCTCTTTTGGTGCCTAGGCAAAAGTATTGTGAA TCATTAAACCAAACTATTAGGAGGAAAACAAGGACAGTGATGGTTGGTGATGTGTCTCTTGGTAGCGATCATCCTATAAGAATTCAGACAATGACTACAA CTGATACAAAGGATGTAGCTGGAACAGTTGAACAGGTAATGAAAATAGCTGACAGAGGAGCTGATATTGTACGGATAACAGTTCAAGGGAAGAAAGAAGC TGATGCATGTTTTGAGATTAAAAACTCCCTTGTGCAGAAAAACTACAACATACCATTGGTGGCTGATATTCATTTTGCCCCTGCTATCGCTTTGCGAGTT GCTGAATGCTTTGACAAGATTCGTGTCAACCCTGGCAATTTTGGTATCATATCTTCGTTAGTTCAGTAGTCTTCTTTTCCCTTTTATTTTTTGATGTATT GGCTTGTATTATGAATCCATGATGCCGATGGTGGTATTTCACAGCTGATAGACGGGCTCAATTCGAACAATTAGAGTACACAGAAGAAGATTATCAGAAA GAGCTTGAGCATATTGAACAGGTTTTCACACCATTGGTTGAAAAATGTAAGAAATATGGGAGAGCAATGCGCATTGGGACAAATCATGGCAGTCTTTCAG ATCGTATAATGAGCTACTATGGAGATTCTCCTCGGGGAATGGTTGAATCTGCTTTCGAATTCGCAAGGATATGCCGAAAGTTGGACTTTCACAATTTCGT TTTCTCTATGAAAGCGAGCAACCCGGTTATCATGGTCCAGGCATACCGCTTACTTGTAGCTGAAATGTATGTTCAAGGCTGGGATTATCCATTGCACCTG GGAGTTACTGAAGCTGGAGAAGGTGAGGATGGGAGGATGAAGTCTGCAATTGGAATTGGAACTCTTCTTCAGGATGGATTGGGCGATACAATTAGGGTTT CTCTCACAGAACCACCCGAGGAGGAGATAGATCCTTGCCGAAGGTTGGCAAACCTTGGAATGAGAGCATCTGAACTTCAGAAAGGGGTGGCACCTTTTGA AGAAAAGCATAGACATTATTTTGACTTCCAGCGGCGATCCGGTCAATTGCCAGTGCAAAAAGAGGGTGAGGAGGTGGATTACAGAGGTGCTTTGCATCGG GATGGTTCTGTTCTCT BLAST
Tissueflowers
Gene nameLI_gene_62607; 
Additional informationdetails; 

Expression of Ll_transcript_189047

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_189047

Blastp4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic from Arabidopsis with 71.28% of identity
Blastx4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic from Arabidopsis with 92.41% of identity
Eggnog4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity(COG0821)
KeggLink to kegg annotations (AT5G60600)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019458594.1)
PfamGcpE protein (PF04551.13)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;