Id Trinity | FTRINITY_DN56725_c0_g1_i4 |
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Name Transcript | Ll_transcript_189378 |
Sequence | TTTCAACTTGAGGGCTCATTACTCATTTATTGTATTCTACAAGTGCTTCATTTCAGTTCTGCCTCTCTTTTTTCTTCAGGCAAGCTATTCTCCTTTCATG TTTTTTCTTCTTTTATGTATTTTATTAATATTTGTTATCTTTAATTGGAGTGTGATTATATGGAAATTATGTACTTTTGAAAAAGTTGTAGTTTTGAAGA AGTTGTAGTTTATTAAGGATGAGATGGAAAAGTTGGTATTTAGTGATTTCATCAAGTTTTTATCTTTTTTGTCTGTGATTTCATTTTCTATCATTTTTTG GGCTTTTGATTAGTGGTTTTGAACATTTTATGGCTTTAACAAACTTGTTTGTGGTTCTTTAGTATAAAGGTATGGCCTGGGAAGGAAATTAAGCTTGGAA GAGGAAGTCAAAGTGATATAGAAACTTCCATTGCAATAAAAAGAAAATTTTGAAAGATCTATTCTCATTCCATGTTATTAATGAACAAAGATCTTGTGTC TCAAATCCTGTCCTTCATCAATGATAATGAAGCAAAAAGCAAAAAATAATGAATGTTTAATTTCTTAATTGACATGTTTTCATTGGTGCGAGATTTTTTG GACATTGGGAAACATATCTTTGTTTGTTATTAATGTTCTTGTATGTGTATAAGTAACAAATTATGATATTTTAATTATAAAGGCTATTTTGCTTCATACT AATATTCACATGTTTTGAACACTCTTCAGACTACTTGTCATGGATTGCTACTATGGTTGTGATGTCAATGATTTTAGGGTTCCTAAAGATCAAGATTTAT TGGATTGGCATCCTTTACCAGAAAGTTGGTCAAACTGGGGAATAAGTGCTCCTGAAGGTTTTGATTCACCTAAGCAGTATTTCACCAGCGATAGAAATGC GTCCGACTTAGAATTCGATTTCATGGAAGAAAGTTTTGGTAATGAAGTTGAGCTTGAACATTCTCTAAATGATAAAGATCAGTCTACCAGTTCAAGTTTT CAACAAACACTTTCTTCGGATCAGCGTAATTACGAGCTTCAAGGCCTATCATGTTTAGAACAGACGGGTGACATTTTCTTGTATAGCTTCTGAAATTCTT TTACTTGGCATATGTATGCTATACATTGTAGGAAACCCGGTGCAAATTGAATTGCTCTGTGATGTTTTTGCATTCCAAATTCGTCATATTTATCTTTATG ATTGGAGCCAAAACTGACACTAGCACAAACATACTACTTATGGTTATGGTTCATAGAACTCTATAGCATGAACCTGTTATAGAATGGTAAGGGCTCCTCC CCCTTTCTCGAATAATTCTAGCCATAATTCTATTACAAAAAGTCTTATTTTCCATCTTGCATTACTCGTGTATCATAACCAACAGAGACATTCAAGTTCA CTGGCTTAACAGTTCAATGACTATTATTGTGTTACAACCCTGACATGTTTCACATAATGCAGGGATTCTGTGATTGACGATCTGTCCTGTGTTGAAGAAC AACACAATTCCTTTTACTTTTGTCCTGAAAACCCATGCAGTAGTACACCTCGTGGATTGCAGAAAGATATCGAAGCTTCAAAGTTTGTTCCAAACAACTT AAACTCTAAGGATTGCCTAGATATAGAGGTGAAATTTGACTTTTGTCTAGTACTTGAAGGGTGTTTGTCTATCATTTGTCTCGGAGATGCTATGAGCCTA TGACCTTGGTTTTCTAGAAATAATCTGTTGAAACTCTCTCGCATATACCATGATGATATGGATAAACGCCGTCTCCCCCCACCTTTTGTTTTGTTTAGAG TGTTACATAGCTCAAATGAACAATTCACTTAGTGTTGGTATAGACGGAAAAGTAACATCTGTAGTTTTTTTAAAACATGTTGATATTTTGTGGGAAAATA GATTGAATCATGACTGTATATGATTGTTGAAACCAATGGAACTAGCTTTTATCAGTTTTGGGGCTTACGGTATTATCGTAATCTATATAATTTCTCTTTA AGGTTCTGACAGTCAAATACTTGTACCCCTTTAAGCAGTGCGATAGATATGAAGCCATGCATGAGCAGTATTCTAATGAAGAATCGATACTGCAGAATCT TGAGATGGCAATTGCACAGTTCACTGGGAAAACCCGTATTTGTTTCCGAGATGCCTTATACCGCCTTGCCAGAGATACAAAACATGTAGTAGAGAACCTG GATGGTGGCCTTAACATGCAAACGACAGTGCTAGGGGAAGTTACCAATGAAACCATGAGGTCTGAAGACAATGAAACAATGGAATCTGATACCAACAGTG TTGACAGAGCAGTTGCAAATCTTGTGTTCAACAAGATGGAAACTAACATTCAAGATCTTCCTCTTACAACATCAATCAAATCCAACCAAGAAATAAATGT AACATAAGGTTTTCTGGTAAATGGCTCATCAAAAGCCTCGAATCCGGTACGAAAATTTCATAATCCCATCCACCAAATATTGCAAGGAGGTGCTGAGGTT CATAAATTCCATATGGTGATCCTACATACAAGTCTTTCATGCTAGAGTTTTTGTTAGGTATTATGATAGTGAGCTTAGTAGTAGCTAAACCAGAAATGAG AAAAACCATTTTCCTGTGTAATTATTTAGCACTTTATGCTGCAAAGAGGCCTGTTATTTTTTACTATATTGGTTTCTTTGATCTGTATGTATGTATATAT TTGCACCTTAATTTCATGATGTTTTGAAAAAACTCGTGCATTGCATACTAGTTCTTATCATGGGCATGCAGCATTGCCTTCGGGAATGCGGACAGAGGTC GTGACTGTCATTAGCTCGCCTTGTAATGTAAGGTGTTGGGTTAAGTCCCGCAACGAACACAACCTTCTTACTTATCGACTATTTTTTAGTTTATTTTTTG GATTAAGTGTGGAGATAATCTCTTGAACTAATACACATCTTATCCTTTTATATTGTTGGACTAGATAAGTTCCCATGCCTTTAATTTTTGGTTTATTATT AAGTTTGATATGTTTTTTATTGAGTTTCTTATGCCTAATAGACTCTTACCGTTGTCA BLAST |
Tissue | flowers |
Gene name | LI_gene_62619; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_189378
Blastp | Protein LNK3 from Arabidopsis with 43.4% of identity |
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Blastx | Protein LNK3 from Arabidopsis with 43.4% of identity |
Eggnog | NA(ENOG410Z9PA) |
Kegg | Link to kegg annotations (AT3G12320) |
CantataDB | Link to cantataDB annotations (CNT0002100) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434721.1) |
Pfam | - |
Rfam | SSU_rRNA_archaea (RF01959) |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |