Ll_transcript_189670

• Id Trinity: FTRINITY_DN56735_c0_g1_i2
• Name Transcript: Ll_transcript_189670
• Sequence: CATCTAACAATCTAATGCGTTGTTAGATTGATAATAGTAAGAAATTGGTTAAGGATGAATGAAACATAACACAACACAAAAGAACAGAACACAAAAGGTT TGTCACGAGAAACGCAGATACGGTGAAAATGTTGTTCTGTGAAGCATAAGCATGCAAAGCTAAATTCCATTTTAACCTCTTACCTTAACTTCTCTCTCTC AATTTCTCTTTGTCTCTTTCTCAATCTCTCTATCATTCTCATTCACCACTTTCACCAATACAATCGTTCATAACCACACAACCACAACCCGTGATCATTT CTTCATTGCTTCAAATTCATTGTCTTCCACTTTCTTCATTCTCCATTTTCTCTCTCTGGGTACTTACTTCTATACAGAGAGAGAGAGAGAGAGAGAGAGA AAGAGAGATATTGAAGAAGGGTGAAGGGGGGTCCTACTGCATAATTTTGGAGGAGGCATCAACAGTCTCTATCAATGATTTCGTTTTATTTTACTTAGTT ACTATTACTCACCCATCTAATCACTATCACTATCACACTTTGCACAATTAACTCTCTCTCTCTCTCTCTGGCTCTTATTCTTCACAAGGAGGATTTGGAA TTAGTCATTGGTGGTGGCTCAAAAGCTCTGCTTTTTTTGGTCAGCTTCTTGGGCAAACCGGATCTCACTCTTATGAAGAGACCTTCAACTCTGGTGTATG TGATTCTTTTACTTGCATTGTTCAGTTGTACCCCATGGATAGTGTGGAGCAGCTCACTCTGCCATGAAGCAAGCTCGGAGGTTGTTCGGCCTCACAGCGT CAGTATTACCGACTTTGGAGCAGTGGGCGATGGGGTCACACTCAATACAAAAGCATTTCAGAATGCCATCTTCTACCTAAATTCATTTTCAGACAAAGGT GGAGCAAAGCTTTTTGTCCCGGCTGGCCAGTGGCTGACAGGAAGTTTTGATCTCATCAGCCATCTAACTTTGTCCTTGGACAAGGATGCAGTAATTCTTG GATCAACAGATATCGACGATTGGCCAGTTGTTGATCCTCTACCATCATATGGGCGAGGACGGGAAATGCCTGGTGGAAGGCATATGAGCCTTATTTACGG GCGAAATTTGACTGATGTCGTCATTACAGGTAATAATGGAACTATTGATGGTCAAGGGAGTATATGGTGGAACAAATTTAGGAACAAAACGTTGGATTAT ACGCGTCCGCATTTGGTAGAATTGCTGAATTCAACAGGAGTTCTCATTTCAAATTTAACCTTCTTGAATTCTCCATTTTGGACTATTCATCCTGTATATT GCAGCCAAGTTACGATTCAGAATGTCACCATCCTCGCGCCTCTTGATTCGCCAAACACGGATGGGATTGATCCAGACTCTTCAGATGATGTATGCATTGA AGACTGTTACATAAGCACCGGTGATGATATGATTTCCATAAAAAGTGGCTGGGATGAGTATGGCATAAAATTCGGTCGTCCAAGCAAAAACATTATTATC CATCGACTAACCGGCCAAACTCAAACCAGTTCAGGGATTGCTATTGGGAGTGAGATGTCTGGTGGTGTATCTGAAGTTTATGCTGAAGATATTCACATGT TCAACTCGAACAATTCTATCAGAATAAAAACTTCTCCTGGAAGGGGTGGCTATGTTAGAAATATCTATATATCTAATGTGACATTGGTTAATGTTACTAC TGCTATTAGGCTTACTGGTTTATATGGTCAACATCCAGATGATGGCTATGACCCGAATGCACAACCCGTAATCGAAAATATTACAATTAACAATGTTATA GGAGATCAAATAAAAAATGCAGGTATTGTACAGGGCATAGAAGGTGACAAATTTGTTAACATATGCCTCTCAAACATTACCGTTAATGTGACATCAAGCA ATCCATGGAACTGCTCTAATGTTCAAGGATACTCTGACAATATTTTGCCAGAAGTTTGTGTGGAACTTAAGGAAAGAATAACCCCTGATCATTCTTCAAA CTGTTACCATTTGTCGAAACCGGAGCCGAGTTCAAAAAACTAAAAAAGAGGTGCATTTTTTCAGCAGGACAAATTTCAAGTGACATAAGAAGTTGAGTGG AGTTGCTGATTTTCTGATATTCCATCTGCACAGAGATACTTAGAGATTATTATTACTTCTTGCAACTTGTGTGCAGCAAGAAATAGTTGAGTGATTCATT ATAAATAACAGCAAGTTTAATGATTTTCTTATGTCTTGCTTTTTTAGCCACAAATTATGGCTTTGGAAAATGAAAAAATAAATATTTTGTGTTTCTATTG ATTCCAAGGAAAAAATGTGGTACTCTAATTAATGGTTACATAGTTCTCTCATTTATCCATATATCGGTTTATCCAGGAA
• Tissue: flowers
• Gene name: LI_gene_62726;
• Additional information: details;

Expression of Ll_transcript_189670

FPKM

• FPAB: 1.4
• FPNAB: 3.1
• LF1: 6.6
• LF2: 3.3
• LF3: 2.8
• LF4: 4.3
• UF1: 4.2
• UF2: 4.6
• UF3: 3
• UF4: 2.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_189670

• Blastp: Probable polygalacturonase from Vitis with 52.88% of identity
• Blastx: Probable polygalacturonase from Vitis with 52.88% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422336.1)
• Pfam: Pectate lyase superfamily protein (PF12708.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;