| Id Trinity | FTRINITY_DN56735_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_189685 |
| Sequence | CATCTAACAATCTAATGCGTTGTTAGATTGATAATAGTAAGAAATTGGTTAAGGATGAATGAAACATAACACAACACAAAAGAACAGAACACAAAAGGTT TGTCACGAGAAACGCAGATACGGTGAAAATGTTGTTCTGTGAAGCATAAGCATGCAAAGCTAAATTCCATTTTAACCTCTTACCTTAACTTCTCTCTCTC AATTTCTCTTTGTCTCTTTCTCAATCTCTCTATCATTCTCATTCACCACTTTCACCAATACAATCGTTCATAACCACACAACCACAACCCGTGATCATTT CTTCATTGCTTCAAATTCATTGTCTTCCACTTTCTTCATTCTCCATTTTCTCTCTCTGGGTACTTACTTCTATACAGAGAGAGAGAGAGAGAGAGAGAGA AAGAGAGATATTGAAGAAGGGTGAAGGGGGGTCCTACTGCATAATTTTGGAGGAGGCATCAACAGTCTCTATCAATGATTTCGTTTTATTTTACTTAGTT ACTATTACTCACCCATCTAATCACTATCACTATCACACTTTGCACAATTAACTCTCTCTCTCTCTCTCTGGCTCTTATTCTTCACAAGGAGGATTTGGAA TTAGTCATTGGTGGTGGCTCAAAAGCTCTGCTTTTTTTGGTCAGCTTCTTGGGCAAACCGGATCTCACTCTTATGAAGAGACCTTCAACTCTGGTGTATG TGATTCTTTTACTTGCATTGTTCAGTTGTACCCCATGGATAGTGTGGAGCAGCTCACTCTGCCATGAAGCAAGCTCGGAGGTTGTTCGGCCTCACAGCGT CAGTATTACCGACTTTGGAGCAGTGGGCGATGGGGTCACACTCAATACAAAAGCATTTCAGAATGCCATCTTCTACCTAAATTCATTTTCAGACAAAGGT GGAGCAAAGCTTTTTGTCCCGGCTGGCCAGTGGCTGACAGGAAGTTTTGATCTCATCAGCCATCTAACTTTGTCCTTGGACAAGGATGCAGTAATTCTTG GATCAACAGATATCGACGATTGGCCAGTTGTTGATCCTCTACCATCATATGGGCGAGGACGGGAAATGCCTGGTGGAAGGCATATGAGCCTTATTTACGG GCGAAATTTGACTGATGTCGTCATTACAGGTAATAATGGAACTATTGATGGTCAAGGGAGTATATGGTGGAACAAATTTAGGAACAAAACGTTGGATTAT ACGCGTCCGCATTTGGTAGAATTGCTGAATTCAACAGGAGTTCTCATTTCAAATTTAACCTTCTTGAATTCTCCATTTTGGACTATTCATCCTGTATATT GCAGGTTGGTACCCTACATAAGGATTGAGTATATGATTAGTTCCTTATTTTCTGTACTTCAAGTACTTCCATTAGAATTTTAGACTGTTTTTTTCCGGAT GAACAGCCAAGTTACGATTCAGAATGTCACCATCCTCGCGCCTCTTGATTCGCCAAACACGGATGGGATTGATCCAGGTGAAATTTCTTCCTTGGGCTGG AGTGCCATACACTCAAAATTTTACAAGTATCCTAAGGGCATGTTTGTTTAAAAAACTTAATTAAATGCCTATCACATGAAAGCTTATGACATTCCAATAA GCTCTATTTAGCTTAATACATTAAGCTAAAAAGGTCTTATAGGAAGAACATAAACAATTTCAACAAGATCTTGCAATCATATGCTTAAGTGCTTTCATGA TAACATAAACCGAATAAGCCTTCTATAAACTCTTCTGATCGCTTCGTAGATTAACTTCCGAAAATTTACAGTTTCATGTTGTTTTAAAGGGAAATTTTCA TTGGAGCAACACAAAAAGACAGAAAAAATCTAGACATGTGCATATATCAAAGGAATATCATAGGCTTAAAGCAATGTATCTCTTAATCAATGATTCTAAT AATGTCCTTGCAGCATTTTTTAGAGATTGAAAATTCTCATATATACTTTTCAATTGTGTTCAGACTCTTCAGACCATGTATGTATTGAAGACTGTTACAT AAGCACAGGTGATGATCTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_62726; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_189685
| Blastp | Probable polygalacturonase from Vitis with 61.67% of identity |
|---|---|
| Blastx | Probable polygalacturonase from Vitis with 53.16% of identity |
| Eggnog | Glycoside hydrolase family 28(COG5434) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427919.1) |
| Pfam | Pectate lyase superfamily protein (PF12708.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |