| Id Trinity | FTRINITY_DN56735_c0_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_189687 |
| Sequence | TTTCTAATTCATAAATTCCATTAATTTGTCATTACAATATTTGTCCATGTGGTGATATTTGAAAGGACCATTAATCTTCTCCTTTACAGTCAAATGCATG ATTAATGGCTTATAATAATACTCACAAAACTGCTTAAAGCTGCCTCTTTTCCTGTGCCTACTTCTTCTTCCTCCACTCCACTTTTTCTATCTCTCTCTCT CTTCTTGCTTTGCCACTAGTGCTTTCCCTTCATTGGTCCCTGACCCTGTTCCCACTTTTGATTCAAGAACATGCTTGTGGCATTGCTCTTGCTGCTAGCA TTGAGCAATGCTGTTAGAATTGATGCAGATGGTGGACAATGTGGTTCAAATCCAACACTAGATCCAAGACCACACAGTGTTTCAATTTTGGAGTTTGGTG CAGTTGGAGATGGTAAAACACTAAACACTCTTGCATTTCAGAATGCCATCTTCTATCTCAAGTCATTTGCTGACAAGGGTGGAGCTCAGCTTTATGTACC ACCCGGAAACTGGCTCACTGGTAGTTTCAATCTCACCAGTCATCTTACCCTCTTTTTGGAAAAAGGTGCTGTCATTATTGGATCTCAGGATCCATCTCAT TGGGATGTTATTGAACCATTACCTTCTTATGGCCGAGGCCTTGAAGTTCCCGGTGGAAGATATCAGAGTTTGATAAATGGACATATGCTACATGATGTGG TCATAACAGGTAATAATGGAACCATCGATGGAGTCGGATCGGTTTGGTGGGAGTTGTTTGCCTCTCATTCCTTGAACTATAGCCGACCTCATCTAGTTGA AATTGTAGCATCTGAATTTGTGGTAGTTTCAAATCTTACATTCTTGAATGCCCCTGCATATAGCATCCACCCAGTTTATTGCAGCCATGTACATATTCAA AATGTTTCAATCTCTTCTCCGCCGGAATCTCCTTGTACTGTTGGTATAGTACCAGATTCTTCGGATAGTGTTTGTATAGAAGATTGTGTTGTAACTATGG GATATGATGCAATTGCCCTTAAAAGTGGCTGGGATGAATATGGCATTGCTTATGGCAGGCCCACTGAGAATGTACACATCAGAAAGGTGTATCTTGAAGC ATTTTCTGGCTCTACTTTAGCATTTGGCAGTGACATGTCCGGGGGTATTTCAAATGTTCTCGTGGAGGATGTTCATATTTTCGACTCGAATAGCGGCATT GAGTTCAGAACCATCGAAGGAAGAGGCGGTTTTATAAAAGATGTTGTCATTTCCGACATACAAATGGAGAATGTCTATACCGCAATCGCCGCTACTGGTC ATTGTGGCTCTCATCCTGATGATAAATTTGATCCAAATGCACTACCACTTTTGGATCACATAACCTTGAAGGATGTTACTGGTACAAACATAACCATTGC TGGAAGCTTTGATGGAATAAAGGAATCACCTTTTACTAACATTTGCCTTTCCAATATAACATTGTCTACCAATTCTGTTTCTACTAATACTTGGGAATGC TCAAATGTCTCTGGCTTTTCGGACTCCGTGTCTCCGAAACCATGTCCAGACCTTGCTAGCCCTTCAAATTCTTCCTCATCATGTTTCTCCTACTTGCTGA GTATCACTGGAGGAGAAACTTCAGTACTGTGATTATCCCCTCTCAACAGAAGATTCAATATTCTTGAGTACCTTGCTTCATGAAAAAGTGAAAGGCCATT TGCAACTGAATATTAGGCTTCATTCTTTTCAATAAGACACTTGTTCGGATTATTCAATTTTTCCCAATCAGCACATTATTTGTACAGTTTCATTTCCTCA TCTATGAGTAAAGAAATTTTGGTAGTGCCACCACAAGAGGACTCAAAATTTGATAGTTTTTGCATTGTTCCATTGTGATTTCACTGTAAAGCATGTTGGA TTTGTGTGATACTTCAATTAAAGGAAATTTCTTCATGTTTATGCCATAAATATATCCATGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_62727; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_189687
| Blastp | Probable polygalacturonase from Vitis with 48.61% of identity |
|---|---|
| Blastx | Probable polygalacturonase from Vitis with 48.73% of identity |
| Eggnog | Glycoside hydrolase family 28(COG5434) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440188.1) |
| Pfam | Pectate lyase superfamily protein (PF12708.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |