| Id Trinity | FTRINITY_DN56735_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_189673 |
| Sequence | TGACTCAAGAACATGTTTGTAAGTACGTTTCTAAGGTTCTTTTTGTTTTGTTTTTACTTCATGTTCTCTCTTGAGTTTGATTTTAAAACTTTACATTTCA TTCCAAATCTGAGAAGGGGTTCTCAAGTTTCAATTTTTGGTTGGTTTTTAGACGTTTAAGTAAAAGTATGTGTCTTCCATTCATATGGGTCATCTTCTAT GTATGATGTTATATTTGTGTCTGGTTCTGTTGTTTTTTATGGGCATATATGGTGATGGTTATTGAAAGTTCATTCTATTTGATCTCATAAACTTAAGTAT TATCATTTCAGATTTATTTTGACTTGGGACACTCTTTTATGTTCTTACTCATGTGATATGTGTCATTGTTCAATTGAGTCAATTTAGAATCTGTTCCTAA CTCCTCAATTGTTACCAATTGATTAGCATGTAGCATGTAGCATAGCATTGTTTAGTTGTTTTTGCTATGAATTTTTCTCCCACTTTTCTATTCCAATTCT TATCTCAGAAATGCTTTTGAGCTCTATCTGAATTCTGAAGTGAATTATTTATTCAAAGAAAAAACTCTCTATCTTTATTTACTATGCTTGATTCTCCTTT TCTCAATCTCTTCATTAATTCTTAACCTGGGACATAATCTGGTATTTAATTATACTCTATCTTGTGAGAATAATTGGGTTGCATTTTCCCTTTTTTGTAA CTTGTTTTTTCAGGTGGCGTTGCTCTTGCTGCTAGCATTGAGCAATGCTGTTAGTATTGATGCAGAAGTTGGACGGTGTGGTTCAAATCCGATACTAGAC CCGAGACCACACAGTGTCTCAATTTTGGAGTTTGGTGCAGTTGGAGATGGTAAAACACTTAACACTCTTGCATTCCAGAATGCCATCTTCTATCTCAAGT CATTTGCTGATAAGGGTGGAGCACAGTTATATGTACCACCGGGAAATTGGCTCACTGATAGTTTCAATCTTACAAGCCATCTTACCCTCTTTTTAGAAAA AGGTGCTGCCATTATTGGATCTCAGGACCCATCTCATTGGAATGTTGTTGAACCTTTACCCTCGTATGGCCGAGGCCTTGAAGTTCCTGGTGGACGATAT CAGAGTTTGATAAATGGATACATGTTAAATGATGTGGTCATAACAGGTAATAACGGAACCATTGATGGCACGGGGTCCATTTGGTGGGAGTTGTTTGGCT CACATTCCTTGAACTATAGCCGTCCTCATTTAGTTGAAATTGTAGCATCCGAATTTGTCGTAGTTTCAAATCTTACATTCTTGAATGCCCCTGCATATAG CATCCACCCAGTTTATTGCAGTCATGTACATATTCATAATGTTTCAATCTCTGCTCCTCCAGAATCCCCTTATACTGTTGGTATAGTGCCAGATTCTTCT GATAGTATTTGTATAGAAGATTGTGTTGTAACTATGGGATATGATGCAATTGCCCTTAAAAGTGGCTGGGATGAATATGGCATTGCTTATGGCAGGCCCA CTGAGAATGTACACATCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_62727; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_189673
| Blastp | Probable polygalacturonase from Vitis with 51.91% of identity |
|---|---|
| Blastx | Probable polygalacturonase from Vitis with 52.53% of identity |
| Eggnog | Glycoside hydrolase family 28(COG5434) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425838.1) |
| Pfam | Glycosyl hydrolases family 28 (PF00295.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |