Ll_transcript_189680

• Id Trinity: FTRINITY_DN56735_c0_g2_i5
• Name Transcript: Ll_transcript_189680
• Sequence: CTCTATAGTTATGGTAGAATATTGAGGAGGAAAACGTATTCTATGCAAGCAAAAATACCATTTTTATGGTACTTACTGCATTTTCTAATTCTTAAATCTC ATTAATTTGTCATTATAACAAAAAATTTCTTACCAAATATTTGTACATGTTGTGATATGTGAAAGGAACATCAATTTTCTCTTTTACTATGTAATGTATG ATTAATGTCTTATAATAATACTCACAAAACTGGTTAAGGTACTCTTTTCCTGTGCCTGCTTCTTCTTCATACTTTTCCTCCTCTCTTTGTGTTTGCTTTG GCAATAGTGCTGCTTCTTCTTGTCTCCCTTGTTGGTCCCTGACCCTGTTCCCAGCTTTGACTCAAGAACATGTTTGTGGCGTTGCTCTTGCTGCTAGCAT TGAGCAATGCTGTTAGTATTGATGCAGAAGTTGGACGGTGTGGTTCAAATCCGATACTAGACCCGAGACCACACAGTGTCTCAATTTTGGAGTTTGGTGC AGTTGGAGATGGTAAAACACTTAACACTCTTGCATTCCAGAATGCCATCTTCTATCTCAAGTCATTTGCTGATAAGGGTGGAGCACAGTTATATGTACCA CCGGGAAATTGGCTCACTGATAGTTTCAATCTTACAAGCCATCTTACCCTCTTTTTAGAAAAAGGTGCTGCCATTATTGGATCTCAGGACCCATCTCATT GGAATGTTGTTGAACCTTTACCCTCGTATGGCCGAGGCCTTGAAGTTCCTGGTGGACGATATCAGAGTTTGATAAATGGATACATGTTAAATGATGTGGT CATAACAGGTTTTTTCCACTTCCCAATTATTTCTTTACCATTGTCATGGTGTGTGTCTGGAATGAACTTTCATATATGTTTTTGCTTGGCCAGGTAATAA CGGAACCATTGATGGCACGGGGTCCATTTGGTGGGAGTTGTTTGGCTCACATTCCTTGAACTATAGCCGTCCTCATTTAGTTGAAATTGTAGCATCCGAA TTTGTCGTAGTTTCAAATCTTACATTCTTGAATGCCCCTGCATATAGCATCCACCCAGTTTATTGCAGTCATGTACATATTCATAATGTTTCAATCTCTG CTCCTCCAGAATCCCCTTATACTGTTGGTATAGTGCCAGATTCTTCTGATAGTATTTGTATAGAAGATTGTGTTGTAACTATGGGATATGATGCAATTGC CCTTAAAAGTGGCTGGGATGAATATGGCATTGCTTATGGCAGGCCCACTGAGAATGTACACATCAGAAAGGTGTATCTTGAAGCATTTTCTGGCTCTACT TTAGCATTTGGCAGTGACATGTCTGGGGGTATTTCAAATGTTCTCGTTGAGCATGCTCATCTTTTCAACTCAAATAGTGGCGTTGAGTTCAGAACCATCA AAGGAAGAGGTGGTTATATGAAAGATATTGTTATGTCAGACATACAAATTGAGAATGTTCATACCGCAATCGCTGCCACGGGCCATTGTGGCTCTCATCC TGATGACAAATTTGATCCAAATGCTCTTCCACTTTTGGATCACATCACCTTGAAGGATATTAGTGGTACTAACATTACCATTGCAGGAAGTTTTGTTGGA ATAGAAGAATCTCCTTTTACTAACATATGCCTTTCCAATATAACCTTGTCTACCAATTCTGTTTCTGCTATTACTTGGAAATGCTCAAATGTGTCTGGCT TTTCGGACTCCGTGTCTCCAAAACCCTGTCCAGACCTTGAGAACCCTTCAAATTATTCCTCATCATGTTTCTCCTACTTGATGAGTATCACTGAAAGAAA TACTGCAGTGCTGTGATTATACTTTCTCAAAAGAAGATTCATATTCTTGAGAAGCTTGTCAATGAAAACAGGAACAGCCACTTGCAAGTGAAGATTAGGC TCCATTCTTTTCATTAAGATACTTGTTCGGATTTCTTTCATCACTTGCATTCTTGCATGTTGCAATCAGCACACATTATTTGTACAGTATCATTTTTCAT TCATGTGTATGGAAGTTTTGATAGTGCCACCACAGAACTCAAAATTTGATTGTTTTTGCATTAGTCCACTGTGATTTCACTGTAAAGCATGTAGTGGATT TGAGTGATACTTCAACTAAAGGAAATTTCAACTTTCTGCCATAAGTATGTCCATGTTTTATTACTTAAGGTAATGTCAAAGTTGAAAAATCATTACCTCT TAAAAGGATTATAGAATCTCAGTTCAGTTCAGACTCTG
• Tissue: flowers
• Gene name: LI_gene_62727;
• Additional information: details;

Expression of Ll_transcript_189680

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0.5
• LF2: 0.1
• LF3: 0
• LF4: 0
• UF1: 0
• UF2: 0.7
• UF3: 0.1
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_189680

• Blastp: Probable polygalacturonase from Vitis with 40.96% of identity
• Blastx: Probable polygalacturonase from Vitis with 42.81% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425838.1)
• Pfam: Glycosyl hydrolases family 28 (PF00295.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;