Id Trinity | FTRINITY_DN56738_c2_g1_i1 |
---|---|
Name Transcript | Ll_transcript_189054 |
Sequence | CTCCATTTTCTCTCTCTCTCATTTCAATTTCTCCATTTTCTCTCTCTCTCAAACTTCATCTAGTAGAAGAAACAAAACAAGCTCAAAACTGCTTCAATTC TCGTCACTCTTCACGTTTTTGCGATGCACCGCGTGGTTAGTGCGGGTAACACAAGCAACAACAATTCAACTCGCCCTCGTAAGGAGAAGAGGTTAACATA CATTTTGAATGATCCTGATGACACAAAGCATTGTGCAGGCATAAATGGTTTGGCTGTACTTAAGTATGCAGTATCTGATGGGTCTGATTATCTCTTCACT GGGAGCCGTGATGGCAAGCTAAAGCGTTGGGCACTAGCTGACGATGTAGCAACATGCTCTGCAACCTTTGAGTCTCATGTGAATTGGGTTAATGATGCTG TTATTGTTGGTGATAATACACTTGTTTCGTGTTCTTCAGATACGACCGTTAAGACATGGAATGCTTTGTCGAATGGAACATGTACTAGGACGCTCCACCA ACACTCTGATTATGTTACTTGTCTCGCAGCAGCAGGAAAAAATTGTATATGCATTTTAGAGCAATATTGTCGCCTCTGGTGGCCTTGGCGGGGAGGTTTT TATATGGGATGTTGATGCTGCGCTTGCTCCGGTTTCTAAGTGTAATGATGCTACGGTTGATGATTCTTCGAATGGTACGAAGGGTTCTGGCAACTTACAT ACTGTCGGTTCAAGCAGCAATATATGTGTGCACACTACTCAAACAGAAGGTTACATTCCAATTGCTGCCAAAGGTCATAAGGAGTCGGTTTATGCATTGG CAATTAATGAAGGTGGGACAGTTCTTGTCTCTGGTGGCACAGAAAAGGTTGTGCGTGTCTGGGACACTAGATCTGGATCGAAGACTCTGAAGCTAAAAGG GCATACAGAGAACATCAGGGCGCTGCTGCTGGATTCTACTGGAAGGTATTGTTTATCCGGATCTTCGGACTCCATGATAAGGCTGTGGGATATCGGTCAG CAGAGATGTGTGCATTCTTATGCAGTTCATACAGATTCTGTATGGGCGCTTGCCAGCACCCCATCATTTAGTCATGTTTATAGTGGTGGGAGAGACTTTT CACTATACTTGACAGACCTGCAAACGAGAGAGAGTAGTTTGCTTTGCACTGGCGAGCACCCTATTGTTAAATTGGCTTTACATGATGATAGCATATGGGT TGCGTCAACAGATTCTTCAGTTCACAGATGGCCTGCTGAAGGATACAATCCTCAGAAGATTTTCCAAAGAGGCAATTCTTTTATAGCCGGAAACTTGTCT TTTTCAAGAGCAAGGGTGTCGGTGGAAGGATCTAGTCCTGTTCCTGTATATAAAGAACCTACCTTGACTATCGCGGGCATCCCTGCAATAATGAAATATG AAGTTTTAAATAATAAGAGACATGTATTGACGAAGGATACTTCTGGTTCAGTGAAGCTGTGGGAGATCACTAAAGGTGTCGTAGTTGAAGATTATGGAAA GGTTTCATTTGAGGAGAAAAAGGAAGAGCTCTTTGAGATGGTTAGCATTGGCACATGGTTCTCTGTGGATACCAGGCTTGGAAGTTTGTCTATCCATTTG GACACTCCCCAATGCTTTTGTGCAGAGATGTATTCAGCAGAGCTTAACATTGCAGGCAAGCCTGAAGATGATAAGGTTAATTTGGGTTTGGAAACCCTTA AAGGGATCTTCACTCATTGGTTGATAAAAAGAAAGCAAAGAATGGGATCCCCAGCTCCAGCTAATGGGGAATTGTTATCTGGAAAGGATATTGCTGCTAG AAGTCTTGCCCATTCAAGAACTGCCGTTGATGGTATTTCTGAGAATGACGTTATGGTTTATCCTCCGTTTGAATTTCCAGTCACTTCCCTTCCTTCCATT ATTACGGAGGGCACTGAAGGAGGTCAATGGAGAAAAAGAGTTGCAGATTTAGATGGAACTGAGGATGAGAAAGACTTCCCCGGATGGTGTCTGGACTGCC TTTTGAATAACCGGTTACCTTCCAGAGAAGCCACTAAATGCAGTTTCTATTTGCATCCATGTGAAGGCTCTACAGTCCAGATCCTCACACAAGGCAAGCT AAGTGCCCCACGTATATTAAGAACTCACAAGGTTATTAATTATGTAGTAGAAAAGATGGTGCTTGACAAACCTCTGGATAGTGTAGCCAATGGAGGTTTT GCCCCTGTACTTGGTGCATCACAGTTACAGCATCAAGTAGTTGGGGATGGATCTTTCCAATCGGGATTTAAGTCTTGGCAAAAGCGTAAACCTTCTATTG AAATATTGTGCAACAATCAGGTTTTGCCTCCTGATATGAGCTTAGCCACAGTGAAAACTTATATATGGAAGAAAAATGAAGACCTGGTTCTACATTACAG AGTGGTTCAAGGCAGGTGACTACAAATTGCTTATGCATCAGAGGTTTAGTTGTGATTGTATAAGATAGTTCTGAGCATTTAATCTTCTCGGGTTGCCTGC ATTCATCGGTGGCGCTATAAGGTTTCTGTAAATTCTGAGCTCCCATTTACCATTAAATTTAGTGGCACTCTCCAAACCTGCATGGAACAGTTATTTGTTT GGCAGAGAGGTGTTACTATAAATTTTGAATAATTATGTAGCTGGAGTGCATGGATGTTCTGCATCTGCAAGATGATGGCTTTTAATTAACTCTGTTCAGA ATTAGTGATGAACTTAATATTGGGGTGTTGTTCTTCAGGAATCAGTTTAGTTAATAGATATGACAGCAAAAACATTGTAAATTTGAATTGTGCATCAAAG ACCTATCTACCCATTATTTTTTTTTAATTATTAATTATTAATTATTAACAATATTATCCTCTTTAGTCATTATTCTCACTCTGTATTTGGGTCCTTTGTG TTTGAGAATATATGATATGCATTGAAAATGTGGCTTATAATTG BLAST |
Tissue | flowers |
Gene name | LI_gene_62748; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_189054
Blastp | WD repeat-containing protein 48 from Gallus with 33.54% of identity |
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Blastx | WD repeat-containing protein 48 from Gallus with 35.17% of identity |
Eggnog | WD repeat domain 48(ENOG410XRJ5) |
Kegg | Link to kegg annotations (420427) |
CantataDB | Link to cantataDB annotations (CNT0001516) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419683.1) |
Pfam | WD domain, G-beta repeat (PF00400.31) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |