Id Trinity | FTRINITY_DN56738_c2_g1_i34 |
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Name Transcript | Ll_transcript_189094 |
Sequence | AATGGGTCAACGGATCTACCAGAATAAAATCCAACGCCCATATTTACATTACAATACATCACATCCATCTTCATTTTCTCTCTCTCTCTCTCAAACTTGG GTAGTAGAAGAACAAATTAACAAGCACAAAACTGCTTCTATTCAATTCTCTTCACTCTTCACGTTTCCGCGATGCACCGCGTGGCTAGTGTGGGTAACAC AAACAACAATTCAAACCGCCCTCGTAAGGAGAAGAGGTTAACATATGTTTTGAATGATTCTGATGACACAAAGCATTGTGCAGGCATAAATGGTTTGGCT GTACTTAAGTATGCAGTATCTGATGGGTCTGATTATCTCTTTACTGGGAGCCGTGATGGCAGGCTAAAACGATGGGCACTATCTGAGGATGCAGCAACAT GCTCTGCTACCTTTGAATCTCATGTGGATTGGGTTAATGATGCAGTTATTGTTGGTGATAATACACTTGTTTCATGTTCTTCAGATACGACCCTTAAGAC ATGGAATGCTTTGTCCAATGGAACTTGTACTAGGACGCTTCACCAACATTCTGATTATGTTACTTGCCTTGCAGCAGCGGGAAAAAATAGCAATATTGTT GCCTCTGGTGGCCTTGGTGGAGAGGTCTTTATATGGGATCTTGATGCTGCACTTGCTCCGGTCTCTAAGTTTAGTGATACTATGGTTGATGATTCGTCAA ATGGTATGAAGGGTTCTGGCAACTTACGCACCGTTGGCTCAAACAACAATATATCTGTGCAGACTACTCAAACAGAAGGGTATATTCCAATTTCTGCCAA AGGCCACAAGGAGTCGGTTTATGCATTGGCAATGAATGAAGGTGGAACAATGCTTGTCTCTGGTGGCACAGAAAAGGTTGTGCGTGTCTGGGACACAAGA TCTGGATCAAAGACTCTGAAGCTAAAAGGGCATACAGATAACATCAGGGCTCTGCTTTTGGATTCCACTGGCAGGTTTGTGGATATCTAAGTATAACATT TTTCTGACAAGTGAGCTGTGATATTTTTAACATTCATTAGCGCAGGTATTGTTTATCAGGATCTTCAGACTCTATGATAAGGCTTTGGGATATAGGTCAG CAGAGGTGTGTGCATTCTTATGCAGTTCATACAGATTCTGTTTGGGCACTTGCCAGCACCCCAACATTTAGTCACGTTTATAGTGGTGGAAGAGACTTTT CATTATACTTGACAGATCTGCAAACGAGAGAGAGTAGTTTGCTTTGCACAGGCGAGCACCCTATTGTTCAATTGGCTTTACATGATGATAGCATATGGGT TGCGTCAACAGATTCTTCAGTTCACAGATGGCCCGCTGAAGGATACAACCCTCAAAAGATTTTCCAAAGAGGCAATTCTTTTTTAGCTGGAAACTTGTCC TTTTCAAGAGCAAGGGTTTCAATGGAAGGATCTACTCCTGTTCCTGTATATAAAGAACCTACCTTAACCATCTCGGGCACCCCTGCAATAGTTCAACATG AAGTTTTAAACAATAAGAGACATGTACTAACGAAGGATACTTCTGGTTCAGTGAAGCTGTGGGAGATCACTAAAGGTGCTGCAGTTGAAGATTATGGAAA GGTTTCGTTTGAGGAGAAAAAGGAAGAGCTATTTGAAATGGTTAGCATTGGCACATGGTTCTCTGTGGATACCAGGCTTGGAACTTTGTCTGTCCATTTG GACACTCCCCAGTGCTTTTATGCAGAGATGTACTCAGCGGAGCTTAACATTGCAGGCAAGCCTGAAGATGATAAGGTTAATTTGGGCTGGGAAACCCTTA AAGGGCTCTTGGCTCATTGGTTGATAAAACGAAAACAGAGAATAGGATCCCCAGCTCCAGCTAATTCAGAATTGTTATCCGGAAAGGATATTGCTGCTAG AAGTTTTGCCCATTCAAGAATTGATGTTGATGGTAATTCTGAGAATGATGTTATGGTTTATCCACCTTTTGAATTCCCAGCAGTTTCCATTCCTTCCATC ATCACGGAGGGCACTGAAGGAGGTCCATGGAGAAAAAGAGTTACAGATTTAGATGGAACTGAGGATGAGAAAGACTTCCCCGGGTGGTGTTTGGACTGCC TTTTGAATAACCGGTTACCTTCCAGAGAAGCTACAAAATGCAGTTTCTATTTGCACCCATGTGAAGGATCTACAGTCCAGATCCTCACACAAGGGAAGCT AAGTGCCCCGCGTATATTAAGAATTCACAAGGTAAGTCTTGATCTTTATACTAATTGACAATTTGGAAATAATGGTTTCATTTATAATCTTTACATGTGT TGTTTAACTTTGATCGTGCTTTCCAATAGGATTTGTTGTTTTTTGTTTTGCTTGTGTGTGGAGCCTGTAGGTATGTTTCTACCTGGTAGACAATGCATAT CTCAGTGATCAACTTAGCCTTTTCCTTTTCTTGTTGGTATAGGTTATTAATTATGTAGTAGAAAAGATGGTGCTTGACAAACCTTTGGATAGTGTAGCCG ATGGAAGTTTTTCCCCTGCAATTGCTGGATCACAGTTACAACTTCAAGCAGTTGGGGATGGATCTTTCCGATCTGGATTTAAATCTTGGCAAAAGCTTAG ACCTTCTATTGAAATATTGTGCAACAATCAGGTTTTGCCTCCTGAAATGAGCTTAGCCACAGCAAAAACCTATGTATGGAAGAAAAATGAAGACCTGGTT CTACATTACAGAGTGGTTCAAGGCAGGTGACTACAAATTGCTTATGCATCAGAGGTTTAGTTGTGATTGTATAAGATAGTTCTGAGCATTTAATCTTCTC GGGTTGCCTGCATTCATCGGTGGCGCTATAAGGTTTCTGTAAATTCTGAGCTCCCATTTACCATTAAATTTAGTGGCACTCTCCAAACCTGCATGGAACA GTTATTTGTTTGGCAGAGAGGTGTTACTATAAATTTTGAATAATTATGTAGCTGGAGTGCATGGATGTTCTGCATCTGCAAGATGATGGCTTTTAATTAA CTCTGTTCAGAATTAGTGATGAACTTAATATTGGGGTGTTGTTCTTCAGGAATCAGTTTAGTTAATAGATATGACAGCAAAAACATTGTAAATTTGAATT GTGCATCAAAGACCTATCTACCCATTATTTTTTTTTAATTATTAATTATTAATTATTAACAATATTATCCTCTTTAGTCATTATTCTCACTCTGTATTTG GGTCCTTTGTGTTTGAGAATATATGATATGCATTGAAAATGTGGCTTATAATTG BLAST |
Tissue | flowers |
Gene name | LI_gene_62748; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_189094
Blastp | WD repeat-containing protein 48 from Macaca with 37.7% of identity |
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Blastx | WD repeat-containing protein 48 from Silurana with 32.37% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000363) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440510.1) |
Pfam | WD domain, G-beta repeat (PF00400.31) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |