| Id Trinity | FTRINITY_DN56738_c2_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_189066 |
| Sequence | TTCTCTTTTTTTTTCGATTTTTTCCATTTCAATTTTGAAATTACTTCGTTTTAGCTTATAATCGCTCATGTTTCCATGTTTTTTTTATTTTATTTTTGGC GTGTTCCGTAGCTTCAACTAGCTCAATCGGTTGTATCTTATCGCTTTATGTTTTGGTGATTGATTACGTTAATTGTATGGTTTTAGATTCACATTTTAGT CTGTTTAGGTTTTTGGATTCATATTAAAAATAATCAATTAAGGGCTAGTTTGTTTAGGTTTTTTTCACAAAAAAGTGATTTTTTTGGTTTGGTTGGGCTA TTTCTAAAAAGCAGGAGCTGAGAAAATCTAAATAGAAGCTATACTTTCCAGCTTCTAAAAAAGTCACATTTTTAGAGCATCTTTTTAAGCCTAAACAAAC AGTTTGTTTGAGCATTTTTTTGGAAGAAAAGTGATTATTTTCATAGAATAAATCACTTCAGACACTTGCACATTTGTTTGGTTGGATTTTAGTTAAAAAG GTTTTTTAAGAAGTTACATTTTTCAGCATCTCTAAAATAACTTTTGCCAAAACCACTTCTGTTAAGCCTAAACAAATGGGCCTTAAATGTTTGATAAACT CACACGGATAGTATCATAGAGAAAAGAGTCTGTAGAATCAGGGAAAGAATGAGGTTGAAGTTGCCCTGGATGTACATGTTACTATGACATGATTGTAGAT ATTGAGAAAACTGAGGTCAATCTCGTTTGATGGCAGAAAACAGTTGTCCATAAACTGAGCAGTGATTACTTGAAGTTGTATTGGCTATTGGGATAAGTTT TCAGCCTAGATATCAGTTATGCAAATTGTTATTCTAGGGTTTCATGCCACATTATGCTTGTTGGCGTATATGTAATGTTATGGTCTTATTTGAGGTTGCA TGGGTCACATTTCTTGAAGTTCAGTAGAAGTTTTGGTTCTACAAGGATGTTATAAAGTAGATTTTGTAGAATTATATTTGTTATTTTGTATTTACATACA CTGCTGAAAAACATGACATTTGATAAAAAAATCCATTGGGATTTGCATATTCAAGAACTGCTTGGTTATGCGGATACCTAAGACATTTGTGTTTATGACT TCTGTGGACGTGCCTGGTTATGTCTTAAACTTTGCCACTGAAAGGGTTATTCTGTAGCCTGTATTGTGAACCTTCTTTGTTAAATAAATGAACTACGTCA TCTGTTTTCCCTCTCCTTTTTAGCACTATTGGAAATGCACCTAAGTTGAATTTCGTAATTGGAATTGCTCTATTTAATTGACTCCTGTGTATACATTTAA TGTTATGTGATTTATGCACTGTCATAGTTTCCGCGATGCACCGCGTGGCTAGTGTGGGTAACACAAACAACAATTCAAACCGCCCTCGTAAGGAGAAGAG GTTAACATATGTTTTGAATGATTCTGATGACACAAAGCATTGTGCAGGCATAAATGGTTTGGCTGTACTTAAGTATGCAGTATCTGATGGGTCTGATTAT CTCTTTACTGGGAGCCGTGATGGCAGGCTAAAACGATGGGCACTATCTGAGGATGCAGCAACATGCTCTGCTACCTTTGAATCTCATGTGGATTGGGTTA ATGATGCAGTTATTGTTGGTGATAATACACTTGTTTCATGTTCTTCAGATACGACCCTTAAGACATGGAATGCTTTGTCCAATGGAACTTGTACTAGGAC GCTTCACCAACATTCTGATTATGTTACTTGCCTTGCAGCAGCGGGAAAAAATAGCAATATTGTTGCCTCTGGTGGCCTTGGTGGAGAGGTCTTTATATGG GATCTTGATGCTGCACTTGCTCCGGTCTCTAAGTTTAGTGATACTATGGTTGATGATTCGTCAAATGGTATGAAGGGTTCTGGCAACTTACGCACCGTTG GCTCAAACAACAATATATCTGTGCAGACTACTCAAACAGAAGGGTATATTCCAATTTCTGCCAAAGGCCACAAGGAGTCGGTTTATGCATTGGCAATGAA TGAAGGTGGAACAATGCTTGTCTCTGGTGGCACAGAAAAGGTTGTGCGTGTCTGGGACACAAGATCTGGATCAAAGACTCTGAAGCTAAAAGGGCATACA GATAACATCAGGGCTCTGCTTTTGGATTCCACTGGCAGGTATTGTTTATCAGGATCTTCAGACTCTATGATAAGGCTTTGGGATATAGGTCAGCAGAGGT GTGTGCATTCTTATGCAGTTCATACAGATTCTGTTTGGGCACTTGCCAGCACCCCAACATTTAGTCACGTTTATAGTGGTGGAAGAGACTTTTCATTATA CTTGACAGATCTGCAAACGAGAGAGAGTAGTTTGCTTTGCACAGGCGAGCACCCTATTGTTCAATTGGCTTTACATGATGATAGCATATGGGTTGCGTCA ACAGATTCTTCAGTTCACAGATGGCCCGCTGAAGGATACAACCCTCAAAAGATTTTCCAAAGAGGCAATTCTTTTTTAGCTGGAAACTTGTCCTTTTCAA GAGCAAGGGTTTCAATGGAAGGATCTACTCCTGTTCCTGTATATAAAGAACCTACCTTAACCATCTCGGGCACCCCTGCAATAGTTCAACATGAAGTTTT AAACAATAAGAGACATGTACTAACGAAGGATACTTCTGGTTCAGTGAAGCTGTGGGAGATCACTAAAGGTGCTGCAGTTGAAGATTATGGAAAGGTTTCG TTTGAGGAGAAAAAGGAAGAGCTATTTGAAATGGTTAGCATTGGCACATGGTTCTCTGTGGATACCAGGCTTGGAACTTTGTCTGTCCATTTGGACACTC CCCAGTGCTTTTATGCAGAGATGTACTCAGCGGAGCTTAACATTGCAGGCAAGCCTGAAGATGATAAGGTTAATTTGGGCTGGGAAACCCTTAAAGGGCT CTTGGCTCATTGGTTGATAAAACGAAAACAGAGAATAGGATCCCCAGCTCCAGCTAATTCAGAATTGTTATCCGGAAAGGATATTGCTGCTAGAAGTTTT GCCCATTCAAGAATTGATGTTGATGGTAATTCTGAGAATGATGTTATGGTTTATCCACCTTTTGAATTCCCAGCAGTTTCCATTCCTTCCATCATCACGG AGGGCACTGAAGGAGGTCCATGGAGAAAAAGAGTTACAGATTTAGATGGAACTGAGGATGAGAAAGACTTCCCCGGGTGGTGTTTGGACTGCCTTTTGAA TAACCGGTTACCTTCCAGAGAAGCTACAAAATGCAGTTTCTATTTGCACCCATGTGAAGGATCTACAGTCCAGATCCTCACACAAGGGAAGCTAAGTGCC CCGCGTATATTAAGAATTCACAAGGTTATTAATTATGTAGTAGAAAAGATGGTGCTTGACAAACCTTTGGATAGTGTAGCCGATGGAAGTTTTTCCCCTG CAATTGCTGGATCACAGTTACAACTTCAAGCAGTTGGGGATGGATCTTTCCGATCTGGATTTAAATCTTGGCAAAAGCTTAGACCTTCTATTGAAATATT GTGCAACAATCAGGTTTTGCCTCCTGAAATGAGCTTAGCCACAGCAAAAACCTATGTATGGAAGAAAAATGAAGACCTGGTTCTACATTACAGAGTGGTT CAAGGCAGGTGACTACAAATTGCATATGCATCAGAGGTTTTCTGATGATTGTGTAGGATACTTCTGAGCATTTAATCTTCTTGGGTTGCCTGCATTCAAC GGTGGCGCCGTAAGATTTCTGTAAATTCCGAGCTCTCATTTACCATGAATTTTTTCTCCAGACTTGCTTGGACAGTTTTTTTTCCCTATAGAAGAGAGCT GTTACTATAAATTTTGAATAATTATCTAGCTGGTGTGCATACTTTTACTTGATATGATGGAGTCATTGATGTTCTGCATCTAGAAATTGACTGTTGAGAA TTAGTGGGGATCATAATATTGGGGTGTTCTTCATGAACCTGTGAGTTAATTTAGAGATGACAAAGAAAATATTGTACATTTGAATTTGAATTGTGAGTTA AATAAATACATAGCCATTGAATTATTTAACCATTAGTAATGACATTATTCGATTCATGTAGCCGACCACATCTAGTGGAACTAAGACGTGAATGTTGGTT GTATTTAATCATTGGCAATATTATTCTCATTTTTTTTTCAAATTAGTCATTAATGTGACTCTGTATTTGGGTCTTTTTTGTGTTCTTTCCTTGTGTGTGT TTGTATATTTGAGAAAGTTCAATATGAAATTCTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_62748; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_189066
| Blastp | WD repeat-containing protein 48 from Gallus with 34.59% of identity |
|---|---|
| Blastx | WD repeat-containing protein 48 from Gallus with 34.59% of identity |
| Eggnog | WD repeat domain 48(ENOG410XRJ5) |
| Kegg | Link to kegg annotations (420427) |
| CantataDB | Link to cantataDB annotations (CNT0000363) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440510.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |