Ll_transcript_190092

• Id Trinity: FTRINITY_DN56748_c0_g1_i10
• Name Transcript: Ll_transcript_190092
• Sequence: CAAAAGCACAACTCACGAGTTGAACAAACAAACAAACAACAAAGACATTGAATGAATGGAAGAAGAAAACATGTTCATAATAAACAAAGTGGGTTACCCA TAAAAGGAACTGAAACCTCTTCTTCCACACTTTGTCTTAAGCAACCACTTTTTCTTATGCTTCCTATGTTGCTCTTTTCATTCAGACACTTCAGAAAGAT AGAACTTTTAATCTTATAGCATGAGTGAAACCATTTTCTTCTGCATTCTTATTACATTTCATTATAAATTTTGTTATTTTTAATGATAAGGTTCTTTCAA CTTTCTGCTTCATTTGTCTGCTATTATTCTCTTCTCTATTTTCTTCCATCAAATGATTTGAAGAACATAACATGACAATGGATGAAGATTCCTTAGCACC ACTCACATTTGACAGAACTGTTGAACAGGCAATTGTATCTATAAAGAAAGGCGCATATTTACTTAAATGTGGTCGTCGAGGGAAACCAAAGCTCTGCCCT TTCAGACTTTCTCCGGTAAGCATATGTGAGATGGTAAATTATTTTATGCTGCCAATGTGATCACTCCCTATTGATATGAAACTTGCTTATGCACCATATT TCTTATTGCATTTTGTTCTCCAGATTTGTATAGTTGCATGATATGGTAAACATTCCTTGTTTGAACATTCATATATTTGTCTTATTCCTTCATACGTTAG GACAAAGCTACTAAAATTTGTCTTTTCCCCTGATTCTAGGATGAGAGAAATTTGATTTGGTACTCCGGGAAACAGGAAAAGTATTTGCAATTGAGTGCAG TTACTGAAATTACTCGAGGGCAGGGTAATATAAGGTCCCATGGGCACGAGGAGCCTGGAAAGGATAGCCATTCATTTTCGCTAATCTATGCTAATGGTGA ACGCTCTCTCGATCTGATATGCAAGGATAAAGCACAGGTTGCTTTGTGGCTTGTTGGCTTGAAAGCAGTGATTTCTCGGTGCCAGCATCCTAAACCTTTT AGTAGTTTAAGAAGCTGCAAAGGGGTTCAGAGTTGTGTTAGTAGTCCAGCTGGAATCTTCCGAAGAAAGAAAAATCTTGGCCTTCTGGATGAATCTTCTC CATTTACACAGGTACATAGCGTATGCGCAAGTCCTACTTTGTCACTTTCAGAAAGGTGCTTTTCTGATGGATTTTCGTATGCATCTGATAACCTTTATTC CAGAACTCATGCCGTAAAAGATCATTCAGTCCCGAGTTCACCTTACATTGATCCAGATATTCCTTGTAAGGTTGAATCACCATGTCTTCACAAGGAGTAC AAGAATTTGTCTTATAGGCCTCTGATGCCTCCACCCTCCCCCCGGATACGAAATAACAATGTATTAAAGGATGTGATGGTATGGGGAGGAGGGATTGGAG GTCCATTAGGGATTGGGAATGAAAAGTTTGTCAACCAACATGGGATTTATTCTTTAGTTCCGAAGTTACTAGAATCCACTATGATGTTAGATGTACAAAA TATAGCTCTAGGAGGAAAACATGCTGTCTTGGTTACAAAACAAGGGGAAGTGTTCTGCTGGGGTCAAGGGAAGTGGGGAAGGTTGGGGCAAAAAAATGAT ATTGACATTAGCTCTCCGAAAATAGTTGATTCTCTTAACGGTATCCATATTAAAAATGTTGCATGTGGTGAATACCATACGTGTGCTTTGACTGATTCCG GTGAAGTATATACATGGGGAAATGATGCTTGTAGTGTAGATTTGGCTGATGAATGGAGAAATAGAAGTCAGTGGATACCACAAAAACTTTCCGGTCCTTT ATATGACATTAGTATTTCAAGTGTTGCTTGTGGGGAATGGCATACTGCAATTGTCTCCATCTGTGGGCGGTTATTTACATATGGAGAAGGTACATTTGGC GTTCTTGGCCACGGCAATTGTAGGAGTTTTTCTCAGCCAAAAGAAGTCGAATCTTTGAGTGGTCTCAGAGTGAGGTCTGTTGCTTGTGGATCGTGGCATA CGGCCGCTATTGTAGAAGTCATTGCTGACCATTTTAGGTATAGTACTGCGAGTGGTAAGCTTTTTACATGGGGTGATGGAGATGAAGGGAGGCTCGGCCA TGCTGATAATAGAAGCAAACTTATACCAACATGTGTTTCACAGCTTGTTGACTATGATTTTGTTCAAGTGTCTTGTGGAAGAATGTTGACCGTTGCGCTT ACTACTATGGGCAAAGTTTTTGCAATGGGAAGTGCAAAATTTGGACAATTGGGAAATCCACGTGCTAGGGACAAAGCAGTTATGGTTGAAGGACTTCTGA AAAAAGAGTTTGTTAAAGTGATATCATGTGGTTCATATCATGTTGCTGTTCTGACTTCTGCCGGGAGTGTCTATACATGGGGCAAGGGTGAAAATGGTCA ACTCGGGCTAGGAAATACTGAAGACAGATTCACCCCTTCTTTTGTTGAAACACTAAGAGATAGGCAGGTGGATGCAATAACTTGTGGCCCAAGCTTCACA GCCGCAATCTGTTTACACAAACCTATTTCTATCAGTGACCAATCAGCATGTAGTAGTTGTAGGTTGCCATTTGGGTTCACAAGGAAGAAGCATAACTGTT ATAACTGTGGTTTTCTATTCTGCCATGCATGTAGTAGTAAAAAAGCTATCAATGCATCACTAGCCCCAAGTAAGTGCAAGGCTTTTCGGGTTTGTGATCA GTGCTTCGATAAACCTCAAGGAAGTACATATTCTGGAATGGCGTCAAAGTCCGGAAGTTACAACACTCAACAATTACTGAAGCATCAAAACAAAATTTCC GATCTGACTGATGATAGGGGAGAAACAACAGTAGCACAGAGTGCCATGTCTCTTGGTCAATCATGTTACAGGAAAAGCATGCCGAGTGGACGGAAGGACT GGAAAAACCAACAAGAAAGCCAGCAGCATTTAGAAGATAATTCTTCTGTGTTGAGTGGAGTATCGCGATGGGGGCAAGTTCCATGCCCTGATTCGTTTAA CATCAATTGTACAGAACGATCAGTTATGCGTGTTTCTTCATCCAAAAATAAATTAGCCACTGTTTCACCAATAGAAATAGAATCTGCAGCATGCAACTTC ACTACTGCTGAGACAGATACAACAAAGTCAGATAAGATGCTCATAGAAGAAGTTCAAAGACTGGGAGCTGAGGCTAGAAGACTTGAAGAGCAGATTGAGC TCAAAAACCAAAAATTACAAGAGTGTCAACAAAAACTCGAGGAGAGTTGGCTTGTGGCTAAGGAGGAAGCTGCTAAGAGCAAGGCAGCAAAAGAGGTCAT AAAAGCTTTGGCATTAAGGCTTCATACATTATCAGGAAAAGATAATGGTGGACAAGAAGAAAAGGTTATACATGAATGTCTGCCTAATTTGGCTCACATA CAAACAGATATCAAGAGTCCAAAAGTTAGCAACATGGACAGTCTATCAAATTCACCTATAGTATTTTCCGATACACTAAAATCCAAAATTGGGAGAAGTA TGCTCCTTAAAAATGATAAATTATCGGAGAACTTGAACTTCAATAGAGCAGAACCACAAGAAGACAGCAACAGCTTGAAGGCTGAATGGGTAGAACAGTA TGAGCCTGGTGTTTACATCACATTAACAACCTTATCATGTGGAAAAAAGGGCCTTAAGCGAGTGAGATTTAGCCGGAAACGATTCTCGGAGAAGGAAGCT GAAAGATGGTGGGAAGGGAATCAAGCCACAGTCTACCATAAGTATGATATTGAAGGATATACAGACACAAGACAAAGTTGAAAGGCTAATTATTTACTTG TCACTCATTTTTAGTAGTTTTGTTTTCTCCAGTTATTGGTATAGGTGGTGATTTTGGCTTCATGTTTAAGATTAGAAGTTTAATGCAAGAAATAGTATGC ATTCATGTATCTAAGTGTTCCTTTGCTCATGAATATATTGGGGCATTCCATCTTGTGTATAGTCACTAATAACAGAGTATATCTTAATTTTATTTTAAAG GTTGTTCTAATTTAAACATGTCAAATATATTTCCATAATGTAAAGTTTGTTGTAATTCAA
• Tissue: flowers
• Gene name: LI_gene_62855;
• Additional information: details;

Expression of Ll_transcript_190092

FPKM

• FPAB: 0.1
• FPNAB: 0.3
• LF1: 0.1
• LF2: 0.1
• LF3: 0.3
• LF4: 0.1
• UF1: 0
• UF2: 0.1
• UF3: 0.2
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_190092

• Blastp: PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 40% of identity
• Blastx: PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 55.79% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (AT1G76950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419884.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF00415.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;