Ll_transcript_190093

• Id Trinity: FTRINITY_DN56748_c0_g1_i11
• Name Transcript: Ll_transcript_190093
• Sequence: AAAAGCAAGTGCAAATAAAATGGCAATGAATGAGAGGGGAAAGGACAATAAGAGCATGGTGTACACGTGCATATGATTTCAAGTCCTGAAATTTATTACA CCCTTCTCTCTCTTTCTTTCTCTTTCTCTGCAAAAAGCACAACTCACGAAGTGAACAAAACAAACTCAGACAGTGAATGAATAGAAGAAGAAAACAGATT CATAATAAACAAAGTGAGTAACCCATAAAAGGAACTGAAACCTTACCCTTCATACTCTATCTTATGAAACCTGTTTTCCTATGTTGTTCTGTTCATTCAG ACACTTCAGAAAGAGAGAGAAAGAGTAAATTATTATTCTTAGAGCATGAGTGAAAAGCATCTTCTTCTGCATTCTTTCTTACCTCTCATCAATCATTTTG TTTTTAATGATAAGGTTCTTCCAACCTTCTGCTTCATTTGTCTGCCATTATTTTCTTCTCTTGTTTCCATCACATGAATTGAAAACCACAACATGACAAT GGTTGAAGACTCTTTAGCACCACTCACATTTGACAGAACTGTTGAACAGGCAATTGTATCTATAAAGAAAGGTGCACACTTACTTAAATGTGGTCGTCGA GGAAAGCCAAAGCTCTGCCCATTCAGACTTTCTCCGGATGAGAGGAATTTGATATGGTACTCCGGGCAGCAGGAAAAGCATTTGCGACTGAGTGCAGTTA CCGAAATTATTCAAAGGCAGGGAAATATAAGGTCCCATGGACATGAGGAACCCGGAAAGGATGACCATTCAGTTTCACTAATCTATGCTAATGGTGGACG ATCTCTTGATCTGATATGCAAGGACAAAGCGCAGGCTGCTTTGTGGTTTGTTGGCTTGAAAGCTGTGATTCCTACGTGCCTGCATCCTAGGCCGTTTAGC AGTTTAAGAAGCTGCAAAGGGGTGCAGAGTTGTGTTAGTAGTCCAGCTGGAATCTTCCGAAGAAAGAAAAATCTTGGCCTTCTGGATGAATCTTCTCAAC TAACACAGGTACATAGTGTATGTGCAAGTCCTACTTTGTCACTTTCAGAAAGGTGCTTTTCGGATGGCTTGTCATATACATCTGATAACATTTATTCCAG AACTAAAGGAGTAATAGATAATTCAGTCCCAAGTTCGTCATATATAGATGCCGGCATTCTTAGTAAGGTTGAACCACTGCATCTTGACAGGGAGTACAAG AAAATCTTGTCCTATAGGTCTCTGATGCCTCCTGCCTCCCCGCGTATACGAAATAGCAATGTATTAAGGGATGTGATGGTATGGGGCGGAGGTATTGGAG GTCGTTTAGGGATTGTGAATGAAAGGTTTGTCAATCAACATGGGATTTATTCTTTAGTGCCGAAGTTATTGGAATCGACTATGATGTTAGATGTACAAAA TATAGCTCTAGGAAGTAATCATGCTGCCTTGGTTACAAAACAAGGTGAAGTTTTTTGCTGGGGTCAAGGGAAGTGGGGGAGGCTGGGGCAAAAAATTGAT ATAGACATTTGCTCTCCAAAACTAGTTGATTCTCTGAACGGGATGCATGTAAAACATGTTGCCTGTGGCGAGTATCATACATGTGCTTTGACAGATTCGG GTGAAGTATATACATGGGGGAATGATGCTTGTAATGCAGATTTGGGTGATGAATGGAGAACTAGAAGTCAGTGGATACCGCATAAACTTTCTGGTCCTTT AGATGGTATTAGCATTTCGAGTATTGCTTGTGGGGAATGGCATACTGCAATTGTCTCCATCTGTGGGCGGTTATTTACATATGGAGAAGGTACGTTCGGA GTTCTTGGGCACGGCAGTCTTAGGAGCTTTTCTCAGCCTAAAGAAGTCGATTCTCTAAGTGGTCTTAGAGTGAAGTCGGTGGGTTGCGGATCATGGCATA CAGTAGCTATTGTTGAAGTCATTGCTGACCGTTTTAGGTATAATACTGCAAGTGGTAAGCTGTTTACATGGGGTGATGGAGATTATGGGAGGCTCGGTCA CGCTGATAATGGAAGAAAGCTTATACCAACATGTGCTTCACAACTTGTTGACTATGATTTTGTTCAAGTGTCTTGTGGAAGAATGTTTACTGTTGCACTT ACGACTATGGGCAAAGTTTTTGCAATGGGAAGTACGAAATACGGACAGCTGGGAAATCCACATGCTAGGGGCAAAGCAATTATGGTTGAAGGACTGCTTA AACAAGAGTTTGTTAAAGTGATTTCATGTGGTTCATACCATGTTTCTGTTTTGACTTCTGCAGGGAGTGTCTATACATGGGGAAAGGGTCAAAATGGTCA ACTCGGGCTAGGCGATACCGAAGATAGGAATACACCTTCTTTCGTTGAAACTCTAAGAGATAGGCATGTAGATACTATAACTTGTGGCCCAAGCTTCACA GCCGCAATCTGTTTACACAAACCTATTTCTATCAGTGACCAGTCAGCTTGTAGTGGTTGTAGGTTGCCGTTCGGGTTCACACGGAAGAAGCATAACTGTT ATAACTGTGGACTTCTGTTTTGCCATGCTTGTAGTAGTAAAAAAGCTAAAAATGCATCTCTAGCCCCAAGTAAGAGCAAGGCTTTCCGGGTGTGTGATCA GTGCTTTGATAAACAACAAGGAAGTACCTATTCTGGAATGGCATCAAAGTCTAGAAGTCACAACAATCAGCAGGTGCTGAAGCATCAAAACAAATTTCCC TATCTCACTGAAGATAGGGGAGAAACAACAGTGACACAGGGTCCATTATTATCTCTTAGTCAATCATGTTACAGGAAAAGCATGCCGAGTGGACGGAAGG CCTGGGAAAACCAACAAGGAAGCCAGCAGCACTTGGAAGATAGTTCTTCGACATTTAATGGAGTGTCGCGATGGGGGCAGGTTCCATGTCCAGACTTCTT TAACGTGAATTGTACAAAAAAATCAGCTATGCATGTTTCTTCATGGAAACATAAATCAGCTACTGTTTCACCATTGAATACAGAATCTGCAGTATGCAAC CTCCCTGTTGCTGAGACAGATACAACAAAGTCAGATAAGATGCTCATAGAAGAAGTTCAGAGGCTGAGAACTGAGGTTTTACTTTTCTTTTAAGCCATAT GTTGTTCTAAGGTTTCATTAGAAAAGGACAACTGTATTTAGTGTTTTTCCAAGTTTCCTTCGGGATTAACATTAGTCGTATTTAGCCCGCTCGGAGACTT GAAGAGAAGTGTGAGCTGAAAAACCAAAAAATACTAGAGTGCCAACAAAAAGTTGAGGAGAGCTGGCTTGTGGCTAAGGAGGAAGCTGCCAAGAGCAAAG CAGCAAAAGAGGTCATAAAAGCTTTGGCATTAAGGCTTCATACATTGTCAGAAAAAGACAATGGTGGACAAGAAGAAAAGGTTATACATGAATGTCCACC TACTTTGGCACACATACAAACAGATATCAAGAGTCCAAAAGTTGGCAACATTGACAGTCTATCTAATTCCCCAATAGTATTTTCTGATACAGTAAAATCC AAATTTGGGAGAGGTATGCTCCTAAAAAATGATAAATTATTGGAGAACTCTAACTTCAATAGTGCAGAACCACAAGAAAGCAGCGCCGACGGCTCGAAGG CTGAATGGGTAGAACAGTATGAGCCTGGTGTTTACATCACATTAACAACCTTATCAAGTCAGAAAAAAGGCCTTAAGCGAGTGAGGTTTAGCCGGAAACG ATTCTCCGAGAAGGAAGCTGAAAGGTGGTGGGAAGAGAATCAAGCTATAGTATACCATAAGTATGATATTGAAGGATATACAGACACAAGACAAAGTTGA AAGGCTAATTATTTACTTGTCACTCATTTTTAGTAGTTTTGTTTTCTCCAGTTATTGGTATAGGTGGTGATTTTGGCTTCATGTTTAAGATTAGAAGTTT AATGCAAGAAATAGTATGCATTCATGTATCTAAGTGTTCCTTTGCTCATGAATATATTGGGGCATTCCATCTTGTGTATAGTCACTAATAACAGAGTATA TCTTAATTTTATTTTAAAGGTTGTTCTAATTTAAACATGTCAAATATATTTCCATAATGTAAAGTTTGTTGTAATTCAA
• Tissue: flowers
• Gene name: LI_gene_62855;
• Additional information: details;

Expression of Ll_transcript_190093

FPKM

• FPAB: 0.3
• FPNAB: 1.5
• LF1: 0
• LF2: 0.3
• LF3: 0.1
• LF4: 0
• UF1: 0
• UF2: 0.2
• UF3: 0.1
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_190093

• Blastp: PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 54.13% of identity
• Blastx: PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 53.78% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (AT1G76950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439521.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF00415.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;