Id Trinity | FTRINITY_DN56748_c0_g1_i17 |
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Name Transcript | Ll_transcript_190099 |
Sequence | TACTCCACTTATTGGCATCCTTAAATTGCTTATAGTTTTAACAAACATCTATTGCAATGCCCGTATACACGTAAAAACTGTGAAAATGATGAAATTTTCC AGCATAATCTTTTATTTTCTGAAAAATCTTTTATAGTTAACAATAAACAAATATAAAACAAGTCAACAATCAAAGCATTTACCCAATAAGTCACTAACTA TTGAATCACGTGTTCGATGCCTCCAAAATATTGTATTTCACCTTCAAACTATAGAATCACGTCTTCGATTGCCTTTCAGGCCTTCTTTGCAAGTTTTATT TTTGTTAAGCCATATGCTGTTCTGAAGTTTCTTTCAAAAAGGACAACTAAAGTTCAATTTCTGTCCATTTTAACAAGCTGTATTTAGGTGTTTTTCCCAG TTTTCTTTCGGATAACTGCAGTCACATTTTTGCCCTTAAGTTGCAACATTGCTCACATTTTACTCTTTTCGTTGCGATTTGTAGATAAAACTTTTCCTGT TAAGTTGCTTGTTGAAATGACATCTGTGTTTTATATTGATCGTGTTCACTTCCGTGCACTACTATTTCATATAGGCTAGAAGACTTGAAGAGCAGATTGA GCTCAAAAACCAAAAATTACAAGAGTGTCAACAAAAACTCGAGGAGAGTTGGCTTGTGGCTAAGGAGGAAGCTGCTAAGAGCAAGGCAGCAAAAGAGGTC ATAAAAGCTTTGGCATTAAGGCTTCATACATTATCAGGAAAAGATAATGGTGGACAAGAAGAAAAGGTTATACATGAATGTCTGCCTAATTTGGCTCACA TACAAACAGATATCAAGAGTCCAAAAGTTAGCAACATGGACAGTCTATCAAATTCACCTATAGTATTTTCCGATACACTAAAATCCAAAATTGGGAGAAG TATGCTCCTTAAAAATGATAAATTATCGGAGAACTTGAACTTCAATAGAGCAGAACCACAAGAAGACAGCAACAGCTTGAAGGCTGAATGGGTAGAACAG TATGAGCCTGGTGTTTACATCACATTAACAACCTTATCATGTGGAAAAAAGGGCCTTAAGCGAGTGAGATTTAGCCGGAAACGATTCTCGGAGAAGGAAG CTGAAAGATGGTGGGAAGGGAATCAAGCCACAGTCTACCATAAGTATGATATTGAAGGATATACAGACACAAGACAAAGTTGAAAGGCTAATTATTTACT TGTCACTCATTTTTAGTAGTTTTGTTTTCTCCAGTTATTGGTATAGGTGGTGATTTTGGCTTCATGTTTAAGATTAGAAGTTTAATGCAAGAAATAGTAT GCATTCATGTATCTAAGTGTTCCTTTGCTCATGAATATATTGGGGCATTCCATCTTGTGTATAGTCACTAATAACAGAGTATATCTTAATTTTATTTTAA AGGTTGTTCTAATTTAAACATGTCAAATATATTTCCATAATGTAAAGTTTGTTGTAATTCAA BLAST |
Tissue | flowers |
Gene name | LI_gene_62855; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_190099
Blastp | Protein Brevis radix-like 4 from Arabidopsis with 59.26% of identity |
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Blastx | Protein Brevis radix-like 4 from Arabidopsis with 52.46% of identity |
Eggnog | brevis radix-like(ENOG41116VM) |
Kegg | Link to kegg annotations (AT5G20540) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419884.1) |
Pfam | Transcription factor regulating root and shoot growth via Pin3 (PF08381.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |