| Id Trinity | FTRINITY_DN56748_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_190083 |
| Sequence | AAAAGCAAGTGCAAATAAAATGGCAATGAATGAGAGGGGAAAGGACAATAAGAGCATGGTGTACACGTGCATATGATTTCAAGTCCTGAAATTTATTACA CCCTTCTCTCTCTTTCTTTCTCTTTCTCTGCAAAAAGCACAACTCACGAAGTGAACAAAACAAACTCAGACAGTGAATGAATAGAAGAAGAAAACAGATT CATAATAAACAAAGTGAGTAACCCATAAAAGGAACTGAAACCTTACCCTTCATACTCTATCTTATGAAACCTGTTTTCCTATGTTGTTCTGTTCATTCAG ACACTTCAGAAAGAGAGAGAAAGAGTAAATTATTATTCTTAGAGCATGAGTGAAAAGCATCTTCTTCTGCATTCTTTCTTACCTCTCATCAATCATTTTG TTTTTAATGATAAGGTTCTTCCAACCTTCTGCTTCATTTGTCTGCCATTATTTTCTTCTCTTGTTTCCATCACATGAATTGAAAACCACAACATGACAAT GGTTGAAGACTCTTTAGCACCACTCACATTTGACAGAACTGTTGAACAGGCAATTGTATCTATAAAGAAAGGTGCACACTTACTTAAATGTGGTCGTCGA GGAAAGCCAAAGCTCTGCCCATTCAGACTTTCTCCGGATGAGAGGAATTTGATATGGTACTCCGGGCAGCAGGAAAAGCATTTGCGACTGAGTGCAGTTA CCGAAATTATTCAAAGGCAGGGAAATATAAGGTCCCATGGACATGAGGAACCCGGAAAGGATGACCATTCAGTTTCACTAATCTATGCTAATGGTGGACG ATCTCTTGATCTGATATGCAAGGACAAAGCGCAGGCTGCTTTGTGGTTTGTTGGCTTGAAAGCTGTGATTCCTACGTGCCTGCATCCTAGGCCGTTTAGC AGTTTAAGAAGCTGCAAAGGGGTGCAGAGTTGTGTTAGTAGTCCAGCTGGAATCTTCCGAAGAAAGAAAAATCTTGGCCTTCTGGATGAATCTTCTCAAC TAACACAGGTACATAGTGTATGTGCAAGTCCTACTTTGTCACTTTCAGAAAGGTGCTTTTCGGATGGCTTGTCATATACATCTGATAACATTTATTCCAG AACTAAAGGAGTAATAGATAATTCAGTCCCAAGTTCGTCATATATAGATGCCGGCATTCTTAGTAAGGTTGAACCACTGCATCTTGACAGGGAGTACAAG AAAATCTTGTCCTATAGGTCTCTGATGCCTCCTGCCTCCCCGCGTATACGAAATAGCAATGTATTAAGGGATGTGATGGTATGGGGCGGAGGTATTGGAG GTCGTTTAGGGATTGTGAATGAAAGGTTTGTCAATCAACATGGGATTTATTCTTTAGTGCCGAAGTTATTGGAATCGACTATGATGTTAGATGTACAAAA TATAGCTCTAGGAAGTAATCATGCTGCCTTGGTTACAAAACAAGGTGAAGTTTTTTGCTGGGGTCAAGGGAAGTGGGGGAGGCTGGGGCAAAAAATTGAT ATAGACATTTGCTCTCCAAAACTAGTTGATTCTCTGAACGGGATGCATGTAAAACATGTTGCCTGTGGCGAGTATCATACATGTGCTTTGACAGATTCGG GTGAAGTATATACATGGGGGAATGATGCTTGTAATGCAGATTTGGGTGATGAATGGAGAACTAGAAGTCAGTGGATACCGCATAAACTTTCTGGTCCTTT AGATGGTATTAGCATTTCGAGTATTGCTTGTGGGGAATGGCATACTGCAATTGTCTCCATCTGTGGGCGGTTATTTACATATGGAGAAGGTACGTTCGGA GTTCTTGGGCACGGCAGTCTTAGGAGCTTTTCTCAGCCTAAAGAAGTCGATTCTCTAAGTGGTCTTAGAGTGAAGTCGGTGGGTTGCGGATCATGGCATA CAGTAGCTATTGTTGAAGTCATTGCTGACCGTTTTAGGTATAATACTGCAAGTGGTAAGCTGTTTACATGGGGTGATGGAGATTATGGGAGGCTCGGTCA CGCTGATAATGGAAGAAAGCTTATACCAACATGTGCTTCACAACTTGTTGACTATGATTTTGTTCAAGTGTCTTGTGGAAGAATGTTTACTGTTGCACTT ACGACTATGGGCAAAGTTTTTGCAATGGGAAGTACGAAATACGGACAGCTGGGAAATCCACATGCTAGGGGCAAAGCAATTATGGTTGAAGGACTGCTTA AACAAGAGTTTGTTAAAGTGATTTCATGTGGTTCATACCATGTTTCTGTTTTGACTTCTGCAGGGAGTGTCTATACATGGGGAAAGGGTCAAAATGGTCA ACTCGGGCTAGGCGATACCGAAGATAGGAATACACCTTCTTTCGTTGAAACTCTAAGAGATAGGCATGTAGATACTATAACTTGTGGCCCAAGCTTCACA GCCGCAATCTGTTTACACAAACCTATTTCTATCAGTGACCAGTCAGCTTGTAGTGGTTGTAGGTTGCCGTTCGGGTTCACACGGAAGAAGCATAACTGTT ATAACTGTGGACTTCTGTTTTGCCATGCTTGTAGTAGTAAAAAAGCTAAAAATGCATCTCTAGCCCCAAGTAAGAGCAAGGCTTTCCGGGTGTGTGATCA GTGCTTTGATAAACAACAAGGAAGTACCTATTCTGGAATGGCATCAAAGTCTAGAAGTCACAACAATCAGCAGGTGCTGAAGCATCAAAACAAATTTCCC TATCTCACTGAAGATAGGGGAGAAACAACAGTGACACAGGGTCCATTATTATCTCTTAGTCAATCATGTTACAGGAAAAGCATGCCGAGTGGACGGAAGG CCTGGGAAAACCAACAAGGAAGCCAGCAGCACTTGGAAGATAGTTCTTCGACATTTAATGGAGTGTCGCGATGGGGGCAGGTTCCATGTCCAGACTTCTT TAACGTGAATTGTACAAAAAAATCAGCTATGCATGTTTCTTCATGGAAACATAAATCAGCTACTGTTTCACCATTGAATACAGAATCTGCAGTATGCAAC CTCCCTGTTGCTGAGACAGATACAACAAAGTCAGATAAGATGCTCATAGAAGAAGTTCAGAGGCTGAGAACTGAGGCTCGGAGACTTGAAGAGAAGTGTG AGCTGAAAAACCAAAAAATACTAGAGTGCCAACAAAAAGTTGAGGAGAGCTGGCTTGTGGCTAAGGAGGAAGCTGCCAAGAGCAAAGCAGCAAAAGAGGT CATAAAAGCTTTGGCATTAAGGCTTCATACATTGTCAGAAAAAGACAATGGTGGACAAGAAGAAAAGGTTATACATGAATGTCCACCTACTTTGGCACAC ATACAAACAGATATCAAGAGTCCAAAAGTTGGCAACATTGACAGTCTATCTAATTCCCCAATAGTATTTTCTGATACAGTAAAATCCAAATTTGGGAGAG GTATGCTCCTAAAAAATGATAAATTATTGGAGAACTCTAACTTCAATAGTGCAGAACCACAAGAAAGCAGCGCCGACGGCTCGAAGGCTGAATGGGTAGA ACAGTATGAGCCTGGTGTTTACATCACATTAACAACCTTATCAAGTCAGAAAAAAGGCCTTAAGCGAGTGAGGTTTAGCCGGAAACGATTCTCCGAGAAG GAAGCTGAAAGGTGGTGGGAAGAGAATCAAGCTATAGTATACCATAAGTATGATATTGAAGGATATACAGACACAAGACAAAGTTGAAAGGCTAATTATT TACTTGTCACTCATTTTTAGTAGTTTTGTTTTCTCCAGTTATTGGTATAGGTGGTGATTTTGGCTTCATGTTTAAGATTAGAAGTTTAATGCAAGAAATA GTATGCATTCATGTATCTAAGTGTTCCTTTGCTCATGAATATATTGGGGCATTCCATCTTGTGTATAGTCACTAATAACAGAGTATATCTTAATTTTATT TTAAAGGTTGTTCTAATTTAAACATGTCAAATATATTTCCATAATGTAAAGTTTGTTGTAATTCAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_62855; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_190083
| Blastp | PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 41.42% of identity |
|---|---|
| Blastx | PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 41.39% of identity |
| Eggnog | regulator of chromosome condensation(COG5184) |
| Kegg | Link to kegg annotations (AT1G76950) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439523.1) |
| Pfam | Regulator of chromosome condensation (RCC1) repeat (PF00415.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |