Ll_transcript_190084

• Id Trinity: FTRINITY_DN56748_c0_g1_i4
• Name Transcript: Ll_transcript_190084
• Sequence: ATTTTACACCATTTCAGAATTATGGTTATAATGTTTATAATAGTGTTCAAATGTTCTCTCACCATTTCTTCTCACATGTTTCCAAAATTTCAATCTGTTT TGGTTCTGAAATGAAATCCTTTCAAAAAGAAATGATTTTTAGTTGTCTGGCCCTGTGATTATTATATATTTTTCTCTACAACATGCATAAAACTATAATG GGTGTCCAAATTTTGGAACTTGGAAGGGAATTACTGCTGGTTTCTGTTCAAAATTCAGAATACAATGATTTTTATTACTGTTTGTATTTTGAGATTTTTC AATACATTGCTCCTCATAATGCATTTCATTCAGTGCCAGTGATATTTGATTGTTGCACTCTCTTTGTCAAAGGAGGGAGAAAAATGGGTTCTTTTCTCTT CCAAGTTATTTTTTCTCAAAAAACCAGTAAGCATAAGAAGGAGTAGGTGTCAGTTTGGTTCTTACATAACAATCATCCGATTTTAGTTTAATACTAATTA GGATTAATTGCAAATGCATCATATTTTTGTTTGGAGTAATTTTCTTATACCTTAGGAATTTCGAGCCGTGGCACAACAGTAGGAGATATTGCCATGTGAC ATTGAAGCATATGTTCGAATCGTGGAATCAGCACTCTTGCAAATGCGAGTTAATATTCCTTTCTCCAAAACTGAAGAAGTGGTTTGTGTTATTTTCAGGC AATTGTATCTATAAAGAAAGGTGCACACTTACTTAAATGTGGTCGTCGAGGAAAGCCAAAGCTCTGCCCATTCAGACTTTCTCCGGATGAGAGGAATTTG ATATGGTACTCCGGGCAGCAGGAAAAGCATTTGCGACTGAGTGCAGTTACCGAAATTATTCAAAGGCAGGGAAATATAAGGTCCCATGGACATGAGGAAC CCGGAAAGGATGACCATTCAGTTTCACTAATCTATGCTAATGGTGGACGATCTCTTGATCTGATATGCAAGGACAAAGCGCAGGCTGCTTTGTGGTTTGT TGGCTTGAAAGCTGTGATTCCTACGTGCCTGCATCCTAGGCCGTTTAGCAGTTTAAGAAGCTGCAAAGGGGTGCAGAGTTGTGTTAGTAGTCCAGCTGGA ATCTTCCGAAGAAAGAAAAATCTTGGCCTTCTGGATGAATCTTCTCAACTAACACAGGTACATAGTGTATGTGCAAGTCCTACTTTGTCACTTTCAGAAA GGTGCTTTTCGGATGGCTTGTCATATACATCTGATAACATTTATTCCAGAACTAAAGGAGTAATAGATAATTCAGTCCCAAGTTCGTCATATATAGATGC CGGCATTCTTAGTAAGGTTGAACCACTGCATCTTGACAGGGAGTACAAGAAAATCTTGTCCTATAGGTCTCTGATGCCTCCTGCCTCCCCGCGTATACGA AATAGCAATGTATTAAGGGATGTGATGGTATGGGGCGGAGGTATTGGAGGTCGTTTAGGGATTGTGAATGAAAGGTTTGTCAATCAACATGGGATTTATT CTTTAGTGCCGAAGTTATTGGAATCGACTATGATGTTAGATGTACAAAATATAGCTCTAGGAAGTAATCATGCTGCCTTGGTTACAAAACAAGGTGAAGT TTTTTGCTGGGGTCAAGGGAAGTGGGGGAGGCTGGGGCAAAAAATTGATATAGACATTTGCTCTCCAAAACTAGTTGATTCTCTGAACGGGATGCATGTA AAACATGTTGCCTGTGGCGAGTATCATACATGTGCTTTGACAGATTCGGGTGAAGTATATACATGGGGGAATGATGCTTGTAATGCAGATTTGGGTGATG AATGGAGAACTAGAAGTCAGTGGATACCGCATAAACTTTCTGGTCCTTTAGATGGTATTAGCATTTCGAGTATTGCTTGTGGGGAATGGCATACTGCAAT TGTCTCCATCTGTGGGCGGTTATTTACATATGGAGAAGGTACGTTCGGAGTTCTTGGGCACGGCAGTCTTAGGAGCTTTTCTCAGCCTAAAGAAGTCGAT TCTCTAAGTGGTCTTAGAGTGAAGTCGGTGGGTTGCGGATCATGGCATACAGTAGCTATTGTTGAAGTCATTGCTGACCGTTTTAGGTATAATACTGCAA GTGGTAAGCTGTTTACATGGGGTGATGGAGATTATGGGAGGCTCGGTCACGCTGATAATGGAAGAAAGCTTATACCAACATGTGCTTCACAACTTGTTGA CTATGATTTTGTTCAAGTGTCTTGTGGAAGAATGTTTACTGTTGCACTTACGACTATGGGCAAAGTTTTTGCAATGGGAAGTACGAAATACGGACAGCTG GGAAATCCACATGCTAGGGGCAAAGCAATTATGGTTGAAGGACTGCTTAAACAAGAGTTTGTTAAAGTGATTTCATGTGGTTCATACCATGTTTCTGTTT TGACTTCTGCAGGGAGTGTCTATACATGGGGAAAGGGTCAAAATGGTCAACTCGGGCTAGGCGATACCGAAGATAGGAATACACCTTCTTTCGTTGAAAC TCTAAGAGATAGGCATGTAGATACTATAACTTGTGGCCCAAGCTTCACAGCCGCAATCTGTTTACACAAACCTATTTCTATCAGTGACCAGTCAGCTTGT AGTGGTTGTAGGTTGCCGTTCGGGTTCACACGGAAGAAGCATAACTGTTATAACTGTGGACTTCTGTTTTGCCATGCTTGTAGTAGTAAAAAAGCTAAAA ATGCATCTCTAGCCCCAAGTAAGAGCAAGGCTTTCCGGGTGTGTGATCAGTGCTTTGATAAACAACAAGGAAGTACCTATTCTGGAATGGCATCAAAGTC TAGAAGTCACAACAATCAGCAGGTGCTGAAGCATCAAAACAAATTTCCCTATCTCACTGAAGATAGGGGAGAAACAACAGTGACACAGGGTCCATTATTA TCTCTTAGTCAATCATGTTACAGGAAAAGCATGCCGAGTGGACGGAAGGCCTGGGAAAACCAACAAGGAAGCCAGCAGCACTTGGAAGATAGTTCTTCGA CATTTAATGGAGTGTCGCGATGGGGGCAGGTTCCATGTCCAGACTTCTTTAACGTGAATTGTACAAAAAAATCAGCTATGCATGTTTCTTCATGGAAACA TAAATCAGCTACTGTTTCACCATTGAATACAGAATCTGCAGTATGCAACCTCCCTGTTGCTGAGACAGATACAACAAAGTCAGATAAGATGCTCATAGAA GAAGTTCAGAGGCTGAGAACTGAGGCTCGGAGACTTGAAGAGAAGTGTGAGCTGAAAAACCAAAAAATACTAGAGTGCCAACAAAAAGTTGAGGAGAGCT GGCTTGTGGCTAAGGAGGAAGCTGCCAAGAGCAAAGCAGCAAAAGAGGTCATAAAAGCTTTGGCATTAAGGCTTCATACATTGTCAGAAAAAGACAATGG TGGACAAGAAGAAAAGGTTATACATGAATGTCCACCTACTTTGGCACACATACAAACAGATATCAAGAGTCCAAAAGTTGGCAACATTGACAGTCTATCT AATTCCCCAATAGTATTTTCTGATACAGTAAAATCCAAATTTGGGAGAGGTATGCTCCTAAAAAATGATAAATTATTGGAGAACTCTAACTTCAATAGTG CAGAACCACAAGAAAGCAGCGCCGACGGCTCGAAGGCTGAATGGGTAGAACAGTATGAGCCTGGTGTTTACATCACATTAACAACCTTATCAAGTCAGAA AAAAGGCCTTAAGCGAGTGAGGTTTAGCCGGAAACGATTCTCCGAGAAGGAAGCTGAAAGGTGGTGGGAAGAGAATCAAGCTATAGTATACCATAAGTAT GATATTGAAGGATATACAGACACAAGACAAAGTTGAAAGGCTAATTATTTACTTGTCACTCATTTTTAGTAGTTTTGTTTTCTCCAGTTATTGGTATAGG TGGTGATTTTGGCTTCATGTTTAAGATTAGAAGTTTAATGCAAGAAATAGTATGCATTCATGTATCTAAGTGTTCCTTTGCTCATGAATATATTGGGGCA TTCCATCTTGTGTATAGTCACTAATAACAGAGTATATCTTAATTTTATTTTAAAGGTTGTTCTAATTTAAACATGTCAAATATATTTCCATAATGTAAAG TTTGTTGTAATTCAA
• Tissue: flowers
• Gene name: LI_gene_62855;
• Additional information: details;

Expression of Ll_transcript_190084

FPKM

• FPAB: 0.2
• FPNAB: 0.3
• LF1: 0.2
• LF2: 0.4
• LF3: 0.2
• LF4: 0.2
• UF1: 0.2
• UF2: 0.3
• UF3: 0
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_190084

• Blastp: PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 41.42% of identity
• Blastx: PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 41.39% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (AT1G76950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439523.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF00415.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;