| Id Trinity | FTRINITY_DN56756_c2_g2_i17 |
|---|---|
| Name Transcript | Ll_transcript_189658 |
| Sequence | TTTTGTTTTATTTAACTATAACTATATTAGATACTTCTCCTTCTCCCTCTTCTTCAAACTGTGAACACTAGCCTTTTTTTCCCAAATTCATTCTATAAAT TGTGAACCCTAGCCTTCTATTCCCAAATTTTATTCTCTAAACTATGAACTCTAGCCTTATTTTCCCAAATTCATTCTCTAAACTGTGAACCCTATCTTTC TCACTCTACTTTTCTCTTTTTCGTTCTTTGGTTATTGACTTTGACGCTATTTGATCACTGAGAAAATTGTATAGAATCGTGACCGATCTTGATTTTTTGC CATGTCATTGTTTTTTCCTTTATCGTTTGTTCAAGTGTGTATTTTATTATTCTTATTGTTATTAAATTTATTTTTCGTTTTTCTTTTTTGCGAAAATTGA ATCAAGATAATTTGCTCCAGAATGCGAAGTGTTTAGTTTAAAGTTGGTGTGTGAAATATAGCAGTTTACTTTGAAAAACTGAGGTATCATATAATATTCA TCTTTATTGGTTGTAATGTTCAATTGTTCATTGTGTGAATTAAGGAACAGGGAAGGAGAAGCATCCAAGAGATGACATTGGGGAAGTTGAAACTAATAGC AATTGCAGCAATAACACCGATGAAGAAGTTCATGATATTTCTTCCGATTCAGATTTCAATTGTGAAGATGAAGAGTTCAGTGTGAACTTCATTCCTGACT TGAATGAAGAACCAACTTCAAGCATTGGTGTTTCTGATGAAGAAGATATTCTTTCTGACTCATATGATGCTATAGAACCGTTATTTAATAGTGGAAAGTC GCAGTCTAGAAGGAAAAGAAAAAAATCTGACTTCGGAGAACCAAGTGATGTAGAGAGAGTGGTTGAGAATGGGGATGATGAGGAACATTTGATGGCTTCT CAGCAATCAGACCCCATTGATTTGACCAAGACAAGAAAGAAGAAAAAAGGGAAAAGGCCAAGAAAGGAAGATTCAAAGCCAGTGTTATTGTGGCATGCTT GGGAAGAGGGGCAAGAGAGATGGGTTGATGAGAATTTGTTGGAAGATTTTGACATAGATCATCAGAGTGAAATAATGAATGAAACTGTCGAGCCATCCTC AGATCTGACTATGCCTTTGCTAAGGTATCAAAAGGAATGGTTAGCATGGGCTTTGAAACAGGAAAGTTCCGTGACTAAAGGAGGAATCCTTGCTGATGAA ATGGGAATGGGGAAGACTATTCAAGCAATTGCTCTTGTCCTTGCCAAACGTGAATTCCACCAGATTAGTTGTGAAGCAGATGAACCATCATCTTCACCAG GTTCATCTACCGTTTTGCCTGCCATCAAAGGCACACTTGTCATCTGTCCTGTGGTTGCTGTCACTCAATGGGTTAGTGAGATTGATCGTTTTACTTTGAA AGGAAGCACCAAGGTGTTGGTTTATCACGGGGCAAAGAGAGAGAAGAGTGGTGAACAGTTCTCAGAGCATGACTTTGTAATAACAACATACTCTATTGTG GAGTCTGAGTACAGAAAGCATATGATGCCTCCTAAGGAGGAGTGCCAATATTGTGGAAAATTATTTAACCCAAGGAGTTTAACTTCTCATCAGAGGTATT TTTGTGGGCCTGGTGCTACTAGAACAGATAAACAAGCGAAGCAAATAAAGAAAAAGAAAAGAGATCTTACTAAGAAGAAGCTCAAAGAATTGAAGTCTTG GGACGGAGAATTGGAAAAGGGTTTTATGAAGAAAAAGAATTTGGAATTGCGGTCGAGAACAAAAGATTCAGATACCAAAGACAGGGAAAAGTCATTTCTA CATGCTGTGAAGTGGCAGCGTATCATACTGGATGAGGCACACTATATAAAATCTAGACATTCTAACACTGCAAAAGCAGTTCTGGCTTTAGAGTCCTCCT ACAGATGGGCATTAAGTGGCACTCCCCTTCAGAACCGGGTTGGTGAGCTGTATTCTTTGGTGCGATTTCTGCAAATTACTCCTTATTCATATTACTTATG CAAGGACTGTGATTGCAAGATACTTGATCATAGCTCCTCTAGACAATGTTCAAACTGCAACCACAGTTCTGTTAGACATTTCTGTTGGTGGAACAAATAT GTCGCCACACCAATTCAGTCATATGGGTATGGCGATTGTGGAAGAAGAGCTATGATATTGCTTAAACACAAAGTTTTAAAGAACATAGTTCTAAGGCGCA CTAAAATCGGCAGGGCTGCCGATCTTGCACTTCCGCCTAGAATTGTTTCATTAAGGAAGGATAGCCTGGACATAAAAGAGCAAGACTATTATGAATCGTT ATACAATGAGAGTCAGTCACAGTTTAATACATATGTCGAAGCAAATACTCTCATGAATAACTATGCTCATATATTTGACCTCCTCACACGATTGCGTCAG GCTGTTGATCACCCATATCTTGTGGTATATTCTGCAACTGCAGCATTAAGAGGTGGGAATTTAGCAGGTAATGGTAATGTTCAACAAGAATGCGGCCTTT GTCATGATCAAGTAGAAGATCCTGTGGTTACCTCTTGTGAGCATATTTTTTGCAAGTCATGCTTGATAGAGTTTTCTGCTTCCTTGGGACAAGTATCATG CCCCTCATGCTCTAAATTGCTTACTGTTGATTTAACTTCCAACATGGTTGCTGGGGCTCATGCTAATAAAACAACAATTAAGGGTTTCAGATCCTCAAGC ATTTTAAACAGAATTCAGCTCGAAAATTTCCAGACAAGCACTAAAATAGAGGCATTGAGAGAAGAAATCAGATTTATGGTTGAAAGGGATGGTTCTGCCA AAGGGATTGTTTTTAGCCAGTACACATCATTCTTGGATCTCATAAACTATGCCCTGAACAAGTCAGGCGTATCTTGTGTTCAATTGAATGGACAAATGTC ATTGTCTGCTCGGGATGCTGCCATAAAGAGGTTTACCGATGACCCTGAATGCAAAATTTTTCTCATGAGCTTGAAAGCAGGAGGAGTTGCTCTCAATTTG ACAGTAGCATCGCATGTTTTCCTTATGGACCCTTGGTGGAACCCTGCAGTGGAGCGTCAGGCTCAAGACAGAATTCACCGAATAGGGCAATACAAACCAA TCAGAATTGTAAGGTTTGTCATTGAAAACACAATTGAGGAGAGGATTTTGAAGTTGCAAGAAAAGAAGGAACTAGTGTTCGAAGGGACTATTGGTGGTTC TTCTGAGGCTCTGGGGAAATTGACGGAGGCTGACTTGAAATTTCTCTTCGTTACCTAAGCAGGCGTGGCCTGTTCTTTTCACAGGAAGATCTATTTACTA CTTACCTGATATACATTTGCTTGAACCATTTTTGTATGATATCATATAGGTGCCACGTATCATTCAATTATATATATATATATGCGCAGTAAAAATGTGT TACTGTATAACTATATAGCTCAGAGGTTGCCTTTGACAATGCTGTTGAAAGCCAAATGTAATTTTGAGAGATGTATATATACTATAAGGAAGTTTATATA TTTATATATTTATATTACAGAGTAGTACTAGTAGTTGGTTGATGTTTACGTGGCAGATGGTTTAATCGAATAAGATAGGGAGAGTATCCTAAACTCAATT TGCTACACCAAGCAGCTGGCTCCACTTTAAGGCATACACTATACCTGTATCGCATTCTGCTAACTATAGAATGCAAACATTTTATGTCCTACTCCTGGAG CAATGTGTGAGTGGAACACCTGAAGAAATTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_62908; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_189658
| Blastp | ATP-dependent helicase rhp16 from Schizosaccharomyces with 47.17% of identity |
|---|---|
| Blastx | ATP-dependent helicase rhp16 from Schizosaccharomyces with 47.17% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413600.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |