| Id Trinity | FTRINITY_DN56767_c5_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_188317 |
| Sequence | CATGATAACAGCTTATTCATTTGCATCATCGGCCTGTATAAATCTACCCGACCCAGATATTATATGTAGTCTCGTGTATTCGGCCGTCTTTTTTATTTTA TTCGATAAAAGTTTTTTTTATTCAATGACTTTATGTACCAAACTACTCTTCCTATATTATGGAACCACATTCCTCTATTCCTTTTTCATTTTTCCTTTTC TGTTCATATTATTTCTGATCAGAACAGATTGTTGGAAAATCTGGTACAATAATGGGGTTTCTACAACTCTTCTATGTTGCTTCTTTACCTGTGATCAAAG TATTATTGATTACTGCAATTGGTTTGTTTCTTGCATTGGATAACATAAACTTATTAGGAGAAGATGCAAGGAAAAAAGTGAACCATATTGTATTTTATGT GTTTAATCCTTCATTGGTGGGTGGTAGTTTGGCCAGCACACTTACTCTTGAGAGTATTGTTATGTTGTGGTTCATGCCTATCAATATTCTTGGCACATTC ATATTAGGCTCAGCTTTAGGATGGATTCTGATTAAAATCACAAGGCCTCCTAAACACATGGAGGGTCTAGTATTGGGTTGCTGTTCTGCAGGTACACTCC TTTGCACAAATAAATAAGCTTATTAGGCTATGGTGGTACCGGTTTCCGGTACGTTGTACGTGGTTCGTATCAGTTTGTCATATTTTATCTCGTTAGTATA AAGTTTCCTTTATGACTAACCCGATATGTGGTATGTGGTATGCCGAATTCGGTCTATGATATATAGGATAAACGAGTGAATCATGCAACTATACTGATAA CATACTGAAGATCCTTGTTCGCTATATATAACTTATTAGACACACTTTCAGGCAATGATTTCATTAATGGTGGATCTGAGTAATCCTAATCATGTAGCTA GCTGAAAATGGTGCTTTGGAGTCTTACTATATTAGAGCTCAATCTAGTTTCACTAAGGCCAAACTTGTCACATGCACAATTTCTCCAAAATCGAACCGAA CCGAACTGAATCACTCCTTCTCAATCTTTTCTTGTTGTGTACCAAATGCTACCCAAGAATATGACACCCAATTTTGAGTTTCTTACAATAACAACCGAAC CTTAATTTCAATAGGTGGATCAGTTACATAGATCGAACAACACCATAATGCTCTAGCATAAATTATGTTCATTGATAAAACATTGATCTATTAATCTTTT CTATTCGTTTCGGCTATGAATCAAAGTAATAATAAATTCTTTCTCTACACATTACATGAGGGATTTACTTGCTAAGTACATCTCGTAATCTTCCTATCCT GCATAATGTTTTTTTAGTATAACCAAAGACATCCCGGAATTAATCCTTTTTGGGGTATATGGCTGTCCCTCCCAGGAATCGAACCTTTAACCTTTTCGCT ACCTACGGATCCAGTTAGGCCTTAAACCACTAAACTAACGCATTATCATACCCTTTCAAGTGTATCTTTTGGCTAAGCTGATATTGAAGATTAACATGAA CAGGAAATTTAGGAAACCTGCTTATAATCATCATCCCAGCAATATGCAAAGAGAAAGGTAGTCCTTTTGGAGAACCTGATGTCTGCAATCAATATGGAAT GGCCTATGCTTCGCTTTCTATGGCGGTACGCGATTTCGATTTATCGAATGTTAACTTTGATGCAGTAATGTGTTGATCTAGTGTGCATTCATCCAAGAAA ATGAAAATAGTAACTTACATTTGGTGATAAATTTGGAACTTTAGATTGGAGCAATATTCATATGGACTTATGTTTACAACATAATGAGAATTTCTGCAAA TAAACTCCACAAAGAAGTTAATACAAGCAATGATCATAGCATATTGAAGGGTTCAGAAGAGATATCAGAGTCACAACAAGATAGTTATTCTGGAACACTT AATTCTGCTAAATATGAAGTGGATGATGCATATACTATATTGCTTTCTAACACAGAATCTGAAGAAAAGGTGAAACTTTCTACAAATTTATTATATAGTG ATTATAATTTCAGGGTAGTTTTGTTTTGCAGGTATTGCATAATAAGAGATTCTCATTTATAATTTTCATCGCGAACGTATTTTCAGTCCGCGATGAATAT CTGCACTGCGTTATTTTAAATTGTATTCCGCAACCGTAATTGCTTTACTTTTGTATCATTGAGTCAATATCTTCAATATAGAAGCAATCTTCTATCTTTC TTTTCATTTTATTTGTAGTAACAATATTGTTTTGGTGATTTATAGAAGGTACCATTCTTAGATAAAGTTAAGCAGCACTTGAGGATGATCTCAGAAAAGT TCAACTTCTCATCCATATTTGCACCATCAACCATTGGAGCAGTATGATAATACTATTCATTTCTTTGGAAACAACTTGTCATGTTTTTTCTCTTGTTATT ATCTTCTCTTGTATATTCTGCACATATAGTAATATAGATTGCACAACTCTTTATTTTGTTTAGCACACAAAACTTTTGAATGTTGGTTCCTATGGTAGAA AAGACGGTAGAATATCGCATTAGAAGCCCTGGTAAGTAGAGTAGTTCAAATGAAGGTCAATCCAATTCCCAGAGGAAAAGTCATAGACGAAACAATTAAG AAAAATTTAGAGACCAGTGGCTTGTTAAAGAACATAATTTATGATACAACATTATGATATCGTTCGATTCACGTAGTCGGTCTCAACTAATGAGATTTAA GGCTTGGTTGTTTGTTAGAAAGTAAGTCTCACATCGCCTACCTCATTCTCTCGAGAATGACTTAAATACTTGTTGTATAGAACTTTGGCATGTGAAAGTA AATGAAGCATGAATTACTTAGATACCTTTGGATATACAATGCTATAAATCATGTAAGGTCTCATTTACGGATGTGGCATGTTATTATTGCTTTGGTAAAA GCTTTGGGACAGGTTTGGGACAACAAATCATTGTCCGTCGTGTACTACTCAAATATTTGGTCATCAGAATAATGTTTGTTAGAAATATCTGAAATATTTG GTGTTAAATGATTTTCTGTTCTCTAAATAAATGTGATAATTTTTCTTTTAATCACAGATTGTTGGCTTTATCATTGGTGTAATTCCTCAAATACGTAAAT TGTTGATTGGAAATGATGCTCCACTTCATGTGATTGAAGATTCTGCTACCATGTTGGGCAATGCAGCAGTGCCAACTCTCACCCTTATATTAGGTGCAAA CCTTCTTAAAGGGTTAAGAGGAACAAGTAATCCTCCATTGTGGACTGTGGTTGGAATAATAGTAGTGAGATATATATTCCTTCCATTGATGGGTATTGGA GTTGTTAAAGGTGCAATATACTTAGGTTTGGTGCAACCAAATCCTTTGTATCAGTTTGTACTTCTACTACAATATGCACTTCCACCAGCTATGAATATAG GAACCATAGCACAATTATTTGGAGCTGGTGAAAGTGAATGTTCAGTTATTATGCTATGGGCATATGCATTGGCATCAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63003; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_188317
| Blastp | Protein PIN-LIKES 1 from Arabidopsis with 63.64% of identity |
|---|---|
| Blastx | Protein PIN-LIKES 1 from Arabidopsis with 60.99% of identity |
| Eggnog | Auxin Efflux Carrier(COG0679) |
| Kegg | Link to kegg annotations (AT1G20925) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446919.1) |
| Pfam | Membrane transport protein (PF03547.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |