| Id Trinity | FTRINITY_DN56769_c2_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_188978 |
| Sequence | TTAAATATTTATTTTTGAGTATTCAAAGTTTCACGGCGTATCAATCAATCAATCATTCCAAGGAGGAATCTCTCTTCTTTCTCACTCCCTATCTTTTCTC TCTTTCTCTCTTTCTCTCTTTCTCTCTCATTCTTCTGTGAAGGAACTTTTGCTTTGGTTTGACACTGTGATTGCACCTTTTTCTTTGAGCATTGAATTTG AGAATTCAGTTTGAGAAGGGTTCATTCCAACTCACTAATAGAACAAAACAGAGAGTCAAGTGCTTTTGTGCTGATGGCAACTAATGAGAATCTTCCACCA AATGTAATAAAGCAACTTGCCAAGGAGTTGAAAAATCTCGATGAATCCCCTCCCGAGGGCATTAAGGTTGTGGTAAATGATGATGATTTTTCTACAATAT TTGCTGACATCGATGGTCCAGCTTGGACTCCTTACGAGAACGGAGTTTTCCGCATGAAGTTGTTACTGTCCCGTGACTTTCCACATTCTCCACCTAAAGG TTTGTTTAGACAGTCATATGGACCATTTTACTGTATACTATTTACATTGTCAGTACCTAATGTTGTTAGATTTTCCCTTTAGTATTTTAACTCGGGGTCT TTTGAACATTTTTTATTGGATGGACTATTTTTGTTAACCAAAAGAGCGAAGACATATATTCCCTGTAGTGCTGTATTGCCTTTCTGTTGTGTTTTGTGAC ACTGTTAAACTTGCAGGTTTTTTCCTAACTAAAATTTTCCATCCAAATATTGCAACCAATGGAGAAATTTGTGTCAACACTCTTAAAAAGGATTGGAATC CTACTCTTGGATTACGGCATGTTCTAATTGTTGTTAGGTGTTTATTGATCGAACCATTTCCAGAATCAGCTCTAAATGAGCAGGCTGGGAAATTGCTGCT TGAAGACTATGACGAGTATGCTAGACATGCCAGGTGAGCTGTAAGGCTATTCTTGTCAATTATTTATTATTCGGGAACTGAAAGTGTAATGTGAAGCTTT AAGTTGCTTACTAATAATATGCGACGAATGAATTTTAGCAACACTGTAATCGAGTGATTTTTTTTTTAAAGAAGTATCTGATTTTCTTTCCTTATCCGCC TAAGTTAAATCCCAGACACCTATTTTTCTGATCTTGACTACTTCACTCAAGCAATCTTTCTGAGTATAGACTATTCTTGATTAAGAATTCTGGATTTATT TTATCGAGTTCAATAAATTTTCACTGAGTTCAATAAACCTGCAGGTTGCATGAGCTAGTTTCCATGCCGGGTTTTGCTTATTTGATTTGTAAAATTTCTC CTTATTCATGTTATTGAGGAGATTCAGTTGTTGCATGCAGGCTCTACACTGGAATCCATGCAAAACCAAAGCCCAAGTTTAAAAGCCGAGCTATATCTGA ATCAACAACTGCTCTGAATGTTGGTCATACAAACACCTCAGTGCTTAGTAGTGAAATAAAAGCTGCACCACCCGGTGCTGAATTGCTATTGCAGTCCTCA TTAGCCCGCTCTACCACACCAACAAGAGGAAATGGTCAGGAACATACCCTTCCAACCGAGACGATCGTCAATGTTTCTGCTAATATAGTAAATTCTGCTG CTGCATCACAGAAGAAGGAAGGTGGACAAGCAAAAGCTCAGCCAGACAAGAAGAAGATAGATGCTAGAAAGAGAAGTTTGAAAAGATTGTAATAAAGTGG TTCAATAATTGAACTTTTCATTTGTGGCTTAGTTTTGCTACTTTATAGAGAGGAAAAAGGGAGGGAGTCCTTGGAAGATGGATTTTGATTTGACATTTTC TGTAATGAGCAACTTCTGTTGGGAGTAAATGGATGAAATTGAACTATTTTCTCTTTGGCCTTTGTGTTATTCTCAGCAGCACCTTTGATAATATATTTTT AGAAGAATATTGCCCTACCAGTATTGCAATATCTTTGTTTTCTAATTGCTTTATATTTTATACTTTTTCAAAGTTTCATTTTCCTTGTACTCCCCAATTA TGCAAAAGAAGAAATAATTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63022; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_188978
| Blastp | Ubiquitin-conjugating enzyme E2 22 from Arabidopsis with 83.33% of identity |
|---|---|
| Blastx | Ubiquitin-conjugating enzyme E2 22 from Arabidopsis with 89.04% of identity |
| Eggnog | ubiquitin-conjugating enzyme(COG5078) |
| Kegg | Link to kegg annotations (AT5G05080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447093.1) |
| Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |