Id Trinity | FTRINITY_DN56770_c3_g1_i3 |
---|---|
Name Transcript | Ll_transcript_188766 |
Sequence | GAAAAAAGTGTGAATTTTCATTTTCCTTTATAGCTAGCTGTTTCCAACAAACACAAGCAAGTGGCGCCTCTTCTATCATCTCTCTTCATTGGAGGTGGTG TTGTTTGGAATATAGACATAGAACACAGGATTCACACATCAAGATTCACCGTCCATACTGTTTTTTTTATCCTTCTGAATTCATAGTCATGCACAAAGAG AAGAGTGCTACTTTGACTGCTTTAGAGCTCCATGACCGACTCACTCGTTCTCAAGCTGCTTCCATTTCCGAATCTAGACAGTTGCCCACTTCGAAGGGCG TAACACAACAAAATCAGAAGCAGTCTAAAGGAGCCAATCCAGAAAGACCAGTCTCAGATAATACACGCCTTGGACATAAAAAGAGGGGTGTTCTTCAGGA TGTCACTAACAGTAGCTGTTTCAATGCAACTACAATTCAGACTAAGAAAAGCAAGTCGACTGAGGCTGCTCAACTTGAAGTTTCCATTGCGGTTCAGTCA GTTGCTATGGAGCAACCACAAATTCAAGTCGGCTCAAATGCGAAGGTTTTACCCGAAATAGGGCTTAGATCAGAAGATGTTACATGCTCCGTGAATTTGC AACACAATGCACTTGACAGTCAGACATTAATTTCTCAAAAGAAAGTATTTGCAGGCCTTCTCGATCCCAACACATGCCCAAACTTCCTAAAACAATCTCT ACCGGCTTTACTATAGTAGGTGCCACCTCAACTTTCCCGTAGTAGGTGCTAGTGTGCTACACCAATACGGAGATGGTCTATCAAACGTAACATAGGGAGA CACATCCGCAGAGGGGTGGTTGGTTAGTGGGTCTGATTTGCAAATTAAATGTTTTAATCTTTTTCTGTTGTAATATTGTATTCCTTCAGTAACTGTAAGG TCTTAAAATTCAGTGAATTGACATTGCTAGCACAGCTGACCATATATTTGAAGTAATCAGGCTATCTTGTATTGAGAAATTTGAAGATTATCTGCTTCTT AGTATTATAAACAGTTTCACTTTGAAGCCTGCTAGAGTGACGATAATTTACAATTATCTATCCTATTATGATGCCTTCCGTTGAGTTAGTGAATCTGCTG TTATAACTTTCTCAGTTCTACAAGTTGTTGAAGCCAAGAAAGTGAACCTTTTTGGAGCTCCAAATATAGCAAAGGATCCAGATGTCATTGATATAGATGC TGATTTTGAAGATCCTCTATTTTGCACCATCTATGCTGTTGATATCTATGACAATTTACGTGTCGCTGAGGTTTGTCTCATAAATGCACCACCAGTTGTA TACACTAGTCTTCTTGTGTCCATTGCCTTTTTGTCTGTACCATTGTAGCTTGTGTTAAAAGTTACAATAATATATTCATATTTACTTTTCCTGCCAGCCT TTTTCATGCTTAAGGTTTATGGTTTGAGTCCACATTCCCAGTGGTGGCATAAAAAAAAAGTCCCGGCTTATCAATAGCTCCATATACAACAACAACCAAG CCTTTATCCCACCAGGTGGGGTTGGCCACATGTATCGAACGACATTATAATGCTCTATCATAATCATATTCATTAACAAAGTGTTGGACTCTTAGTCTAT CCATTTCTCCTATGATTTTTCTTGGTCTCCAGTTTAGCTTTTATTTTATCAATAGCTCCATATATCATCCCTTAATTTAGTGGAATGCTAATTAAGGAAG CAAGATTTAAGATATTGCACCTCCTAAGAAATTTTTTCAACTACATGATTTCAGTGATTTCCCTGTTGTCCCTTTACTTTTATGCACTTTGAATTTAAGA TTATTCAGGTGCCATGATATGATCAATACTAATTATTACAGTGTGATTAGAAAATGCTGTACTGGTGTTGAAAAACATTGCTGTGAAATTGTAACAGATA GTTATAATGCGTGGTGATTGTTAAAGCGTATTTTCATTTGAAACATTACCATGTACTTGGTTTCGAGTTGTTTTCAGAAATGGAATGCAAATTTTTTATA ACCTTGCTGTCAACTGTTTCCCTTGGATTTCTTTCACCTTTTATCTTAAGTTGTTTGCAAGATATTTTATTTTTCAGCTGTCAAGAAGGCCTTATCCTCA CTTTATGGAAACAGTACAGCACGATATCACTAAAACCATGCGAGGGGTATTGGTTGATTGGCTTGTAGAGGTTTCTGAGGAATACAAATTGGTACCGGAC ACTCTTTACCTAACCATTTATCTTATAGATTGGTTTCTCTCCAAAAATTGCATGGAAAGACAAAGACTGCAGCTCCTAGGCATCACCTGCATGTTAATTG CTTCGAAGTATGAAGAAATTAATGCCCCGCGCATTGAAGAATTCTGCTTTATCACCGACAACACGTATACAAAAGAGGAGGTATTGAAAATGGAGATTCA AGTGTTAAAGTGTGCTGCTTATCAACTCTTTGCTCCCACCACAAAAACTTTCCTCAGGAGGTTTCTTCGAGTAGCACAAGCTTCCTACAAGGACCCTAGC TTTGAATTGCAGTGCCTGGGCAACTATCTAGCTGAACTAACACTGATGAACTATGATTTCTTAAATTTCCTTCCTTCTATGATTGCTGCATCGGCCGTAT TTCTTGCCGGGTGGACATTAGATCAGTCAAGCCACCCATGGAATCCAACTCTTCAACACTATGCCGGTTACAAAGCATCCGATCTGAAATCGACAGTTCT TGCATTACAGGAAATGCAGCTGAATACCGATGGCTGCCCATTAACTGCCATACGGACAAAGTACAGGCAAGAAAAGTTTAAATGTGTAGCAGCTTTGTCT TCATCAAAACTGCTTGATGCTCTATTCTGAAGATAAATCTGATTGACAAATGGGAAAAAATAACTCTGAAGTAAGCATAGGTGTAAAGTGAGCAAGTAAA TGCATATCCACCCTTCCTTAGTTAAAGTGCATCTAGATCTCGGACAAAGATCCATTGCCCCAAACCATGTCCCGGGTAAATGAAAACATGTCATGCCAAT TTTTAAAAGTTAAATATTTATTATTTTTCCATTTTTGTTTCATTACCATTTAGTCCGGGACATGGTTTATGACACAGTGTGGAATAACAGATCATTATCC TCGAAATCTCAAGTCACTTTAGCAAATCTTAAGGTTGATGCACCTTACTTGCTTACTTTACATTCAAAGTCACTTCCAACAAGAAGCCTTATCCTGATGA ATGAGAGCAAGGAAGCTCTATTTGTAACTGATATGTTAGCAGCATAGAAGGAAAACTACTTGTTTTGTTGCTCAAGATCTCTCATCATGTCTATCTTATT CTTTCTCCAACTTCCAAATAATTGTTACAAGTCTATTCTTTAATACTTGTATATACTTGAATTTGAACACCAAAACCAAGCATGTGGCTTAGGATGTTTC AAACTCTTGTAATTTTGTTTGCAGAATGTAACAAATGACATGATGAGTAGGTTGTTCCAATAAAAATGTCTTGATCTTAAAGTTAGACTTAACCCC BLAST |
Tissue | flowers |
Gene name | LI_gene_63034; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_188766
Blastp | - |
---|---|
Blastx | Cyclin-A2-4 from Arabidopsis with 72.92% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000534) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436396.1) |
Pfam | - |
Rfam | - |
GO | - |