| Id Trinity | FTRINITY_DN56773_c1_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_190501 |
| Sequence | CCCAAAACACTCCCAATTAGAACAGTGGGGTGGTATTAGGTAACCAGGTATGCAGCTTTTGACACTCACCTTTACCCTTACGACACACAAACACCACTGT TCATAAACACAAAACATGTACCAAAACTAAAATTATCAAAATTATAAACATAGAACATACCATCTCTTCTTTTTTCTAGAAACACATAACCGCTTCTTTC AATTCTCAACAACGCGTTTTCTCTGAGTGATTATTTGATTCATCTGTTTTCATCGAAATTGCTTCTTCTTCCTTCGACGCGCGTGGTTCGGGTATGGATT CGGACGATTTACGTTCCATATTGGATTCTTCGGGCGTGGACGTTTGGTCGTTCATCGACACCGCAATCGCCGTCGCCGCGACGGATTCTGGCGGTGAACT GAAGCGCCGTAGAGACGCTATCGTCGAGAGGCTCTACTCCGCCACCACTGCTCCTCCGCGGTGCCGGAATTGCGACGGAGATAACCGTAGTGTCGTCACC GCCAACGGCGACCAAGTTAGGAGACAACAGAGGACCCGTAGCCCTAGCCCTAAACGGCAATCACCACAACGCGAGCAGCGACGTCGTTTCGCCACCTCTC CCGAAACGCCACAGTCTCTCGAAAACGACGACGATGAAAACGACACCGATTTGGATCCTTACGGTGGCTTGTTCGACGATGAACAGAAGAAGATTCTGGA AATTAAGGAGCTGCTCGAAGAACCTGACCAGTCTGAAGATTCATTGGTGGATTTGCTTCAAAATCTGGCGGACATGGATATTACATTCCAAGCTCTAAGG GAAACTGACATTGGTAGGAACGTGAATCGGTTGAGGAAGCATTCGTCGAATGACGTTCGCAGATTGGTGAAGCTACTTGTCAGGAAGTGGAAGGAAACTG TAGATGAGTGGGTAAAGTCAAACCCACAGGGAGAAGCTGCTACTCTTATGGCTGATGGAGACTCTTCCCCTCTTCAGAAAACCACCCAAAATGGGCATCA TCATATTCCTGATTTTGCTTACTCACCAAATCCACACAATGGGAGTTCTGGGTCTGACCGTAATGAAGCAGAGCTGAAACCAAAACCGAAAGTGATTCCT TCTCGCAGAGAAGCACCACCTCCAAAACCAATTCCATCACCTTTACTTCATACCCCTGCTCCTTCTGCCCTTCAAAACAGGCAGAAAGAACTGAGAGAGA GCAATTTTGATGCGGAGAGACTTGCTTCTGCAAGAAAAAGGCTTCAAGAGAACTATAAAGAAGCTGAAAATGCCAAAAAGCAAAGGACAATTCAGGTTAT GGACATTCATGAGTTACCAAAGACAAAATCCAAGAATACCTTCTTTGGAAAGAACAAAGGCAGTGGCGGTTCTCAGGGGAGGCACTGGTGATACAAACAT ACATGTTCCATTGTTCGTGCCATGTTAACTGTAAAAATGGCTTCTGGATTTTTTGCTCCATAGACCTATTTTTCTTCTGGTTTTAATTATAACTGAAATT AATAATAATCAGAGACAAAAATTAAACTATTGAAATATTTATTTCTGAAAGTGGACTTACCAAACCAAACAAAACCAGCTTTTAGTTGGTTTGTTTGTTT AGGTACATGTGATTTCCTAGAATCAGGACAGGAATGAGGTGGGAATGTAGGTTAAAAAAGTTGTTTTCTTTTTATATGAAACACAAATTTTTGGGTTTGA AAATTGAACTACATTGGTTAATGGTTGCTTCGCTAAACTAGGCATTTTATCCTTTTTCTTAATGAACAAAAGTCAAAGAGATTACCCTACTTAGCAGGGG CGAGTTTGGTGGGTGGGTGTTTAGTTGGTGTTACAATTAATATTGCTGATGGTGTCTTAACACTATGAAGTTGACATGTGCACACGACGTGGCCCTTGCT TTGCGTCAAGGAATTTGTTTTCTGATTCGATTGTTCACGTTAACTTGACGAATCTCTAAAATTAGTATTAGTAGTAATACAGTGTGATCTTGTTAAACTT GAGAAGTAGATTCGTTAAATTTACATGAGCATTTTGGGTAAGGTTTTCTAATAAGCTAAATTTAAGGATGTTGACAATGGATACTGTTTTTATGTTTACC AAATGATACGTGAAGGGAGTACTTTTGAAGTAAGAAATTTTTGTAGACTTAAATTATTCAATTTATCCAACAGTAAATTCTCTTTTAGCTATTAATTCGT ATGTGGGTAATTAATATTCTGCTTCTTTGTGATGGAGGGATAACTGTATTTAGGGACTAGGATATGTAATGTAGTTAATCTACATAATCGCGAATTTGAA ATTGATGAATTAAGGGTAGATATAAGATACTTCTGTAGTTCTGTTAGGGACCACATCTGCTGTGTCATTGTGATTGTGTGTGTTACTATATTCGTGGGAC ATAAAATGTTCACCCGTTATGTGAATTGAAGGGAATATTTTTTATTCCGTGAGGAATAAACCTGTGGGAGAAGATGCATTGTACTTATTGAAATTACTTT GGGCAGAAAGTCAGAAACTTGGTCGTAATTTCCAAAACATCGTACAGCCTCAAATAGTGCGAAAGCTAGTCGGATGACCACTGAAAATTAATGTTTAATT TAGAATTTGTATTAAATCTAAGTTTCAATAAAATAAAATAAATAGTACTAAGCTCTAGTTGATGAATAGGAGAGTGAGTGATACATCATACATGTGAGAA CAAGGGAGGGTGGATTCATGAGAGGAAGAAGATCAAGAGTCAGGAATGACAACTTTCTTTCACTAATTTTCTTGAAGCTTTAGATGTTTATTTGAAAGAG AAAATAGTGTATGCACCGATAAAATGTAAGAGTATTATATATTTTTACATTATCATCTACTATTCATCATTGATCATTAAAAAAAGTAATACAAATAACT TATTTTGAAACGAGAGCAATGATGTATGTTTTCATATGACACAAAAAAATGGCCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63064; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_190501
| Blastp | Probable mediator of RNA polymerase II transcription subunit 26c from Arabidopsis with 54.21% of identity |
|---|---|
| Blastx | Probable mediator of RNA polymerase II transcription subunit 26c from Arabidopsis with 52.46% of identity |
| Eggnog | Transcription elongation(ENOG411201A) |
| Kegg | Link to kegg annotations (AT5G09850) |
| CantataDB | Link to cantataDB annotations (CNT0000464) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417447.1) |
| Pfam | TFIIS helical bundle-like domain (PF08711.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |