| Id Trinity | FTRINITY_DN56773_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_190474 |
| Sequence | ATTCATTATCTATAATATTTTTTTTTTTCTTAATAATATAAAAATATAAAATAAGAATGATGATGAAATAGGAAAATAGGTGGTGATCTAATCTTCAAAG TTCAAACAATTCTCTCTCCCTTCGTTAATCTCCCTTTGCCCACAGGCCCCAGCAAAACATTAAAAAATACCCAAAGGCACCCAAATAGAACAGTGTGGTA TTATTGGTCACCAGGTAAAGCAGCTTCTAGCTCTTACCATTACCATTGCCACACACAAACCCAATTGTGTAGAACACACAGCACATGTACCAAAACTATA ATCTATCATGATGAAAAAAACTTATAATATACTCTCTCCTCTTCTTTATTAACAATTATTTTCATTATCCATTACCTTACGACATTTTTTATTTTCCCTT TCTGGATCTGTAATTCCATTCCTCAGATCTATGCCGTTTTTATTTTTTATTTTCACTATCTAGTCGTTTTGATTCATTTGTTCCTACATGAAACGCAACA ATGAATATTCTTATATTCTATTTTGCGCTATCTTCACCTGAAAAAACAAAACCGGTTCTTCTTGGTTTTCACCAACGCGTTTTCTCTGTTTGATAGGTTG ATTCAACGGTTCTTTTTCGTTCTACACACGCGGTTTGGGTATGGATTCGGAGGAATTCCGTTCCATATTGGAAGCTTCGGGCGTTGACGTGTGGTCGTTA ATCGACACCGCAATCGTCGTCGCCGCGACGGATTCCGGCGAGGAGCTGAAACGCCGGAGGGATGGAATCATCGAGAGGCTCTATTCTGTCCCCGCTGTTC CTCCGCGGTGCCGGAATTGCGACGGCGTTGTTGGCGGCGGGAACTGTAGCGTCGTCACCGCCAACGGCTATGAATTTAAGAAGCAACAGAGGAGCCCTAG CCCTATACGGCAGCCACCACAACGCGAGCAACAGCGCCGTTTTGCATCCTCCCCTGAAACGCCGCAGTCTCCCGACAACGACGAAAACGAGAACGAGAAC GATTTAGATCCTTTCGGTGGTTTGTTCGATGATGAACAGAAGAAAATTCTTGAAATTAAAGAGCAACTCGAAGAACCTGATCAGTCTGAAGAATCATTAG TGGAATTGCTTCAAAATCTCGTAGATATGGATATTACATTCCAAGCTCTGAAGGAAACTGACATTGGGAGGCACGTGAATCAGTTGAGGAAACATTCCTC TAATGACGTTCGCAGATTGGTGAAGCTACTTGTCAAGAAGTGGAAGGAAATTGTAGATGAGTGGGTGAAATCCAATCCGGTGGGAAAAACTGCTACTCTC ATGGGTAATGTTGAATAAATGTTTTAGGAAAATGTCTATGAGATGTTTGTTTACGAGTTGAGTTTTGGAGGGGAAGAGAAAGTAAGGTTTCAGAGTGATG AATCCTTCTCATTCTATCTCGTAGACAGACCCTTAAGGGTTCGAGTAAATTAAATTCTAATATAGACAGTAATTAATAACGTTGGCATTTCCATTTTGCA GCTGATGGAGACTCTCCTGTTATGAAAACCACCCAAAATGGGAATCATCAGGTGAAAGTTTTGTTTTGTTCTAAATTTTTTCCTATAAGTTGAGGCTTGT TTGAGGTGTCGCGAGTAATATTTCACTCTTTTTGCAGATTCCTGATTTTGCGTACTCGCCGAATCCACAAAGTGAGTAATAGCAGCATTTGATTCTAATC TTCTTTTGTTTTGATTTGGTCGATGCATATTACACAAGTATTTTTGGTGATACAGATGGGAGTTCTGGGTCTGACCGCAATGAAGCAGAACCGAAACCAA AAGTGAATCCTCCTCACAGAGAAGCACCACCTCCAAAATCAACTCCACCAGTAGTTCATACTCCTGCTCCTGCTTCCCTTCAAAATGTACGGATATGATT TTATAGCCATTTCGGAATTGGAGTCTATGATGGGGTGAAGATATATCATACATCGACTTAGAAACAAAAGTACAATGAATATGGACCTTAACTTAAAGGG TCTTATGATGTTTTTCTAAAAGCTAGTTAAGCTCTACAAATGCTAAGTGGTCCTAACATGTTGGTGAATAATTTTGCATTGCAGAGACAGAGAGAACCAA GAGAGAGTAATTTTGATGCTGAGAGACTTGCTTCTGCAAGAAAAAGGCTTCAAGCAAACTATAAAGAAGCTGAAAATGCCAAAAAGCAAAGGACGATTCA GGTGATGGATATTCATGAGTTACCAAAGTCTAAATCCAAGAATACCTTCTTTGGAAAGAACAAAGGCAGTGGCGGTTCTCAAGGGAGGCACTGGTGATAC AAACATATATGTTCCATTGTTCGTGCCATGATAATTGTAAAAAAATGGGTTATGGGGTTTTTGTTGTTGAACGATAGACCTATTTTTCTTGTGGTTTTTA GTTATAACTTATATTAATAATAACCAGAGAAATCAAATAAAATCTTGAAATATCTTTCTTAAAGGTGGGCTTACCAACCCAAACCAAATTAGCTTTTTTG GTTTGGTTTGTTGAGGAGCGTGATTTCTGGAATGAAGTGGGAATGTAGGTTCAAAAAGGGATTTTTTTGGATTTAAAACACTGATTTTAGGGTTTGAAGT TTTTAAACTAAATTTGTTAATGGTTGCTTCACTGTACTAAATGTATTTTAGCCTTTTCTTGAAGAACTCAACGAACAAAAGTCAAAGAAATTACCCTACT TAACTGGAGTGGGGACTAGGAATGGAGATCTCTTTATTGAAAAAATAAAAGCAGAAACTTATATTTTTCATTATTTTATGTTACTCTATTAGTATATTGG ATAGGACAAGGGGATATTGTTTCTTTGGAAAAATATATTTAATTTAAAATTTTAATAATTAAATATTTGATAATTAGTTGGGATAGCTTATATAATTGTG GCCCTTTCTCTGCGTCAAAGAATTTGTTCTCTGATTCGGTTTCCCAGGTTAACATGGTGCCTCTTTAGGTAGTACTAGTGTATTACTAATTAGGTGAGCA CCAAACGTTGGTTTAAGTGGTACATGCTTGATTCTCCTTAAGTAAGGTTTTGAGTTCGATCCTTGTGAATGGAAAAAATGTCCGCTGGGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63064; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_190474
| Blastp | Probable mediator of RNA polymerase II transcription subunit 26c from Arabidopsis with 55.35% of identity |
|---|---|
| Blastx | Probable mediator of RNA polymerase II transcription subunit 26c from Arabidopsis with 55.81% of identity |
| Eggnog | Transcription elongation(ENOG411201A) |
| Kegg | Link to kegg annotations (AT5G09850) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430922.1) |
| Pfam | TFIIS helical bundle-like domain (PF08711.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |