Ll_transcript_189501

• Id Trinity: FTRINITY_DN56795_c4_g2_i2
• Name Transcript: Ll_transcript_189501
• Sequence: TAACGATGATGGAGAAGAAGAAGAAGAACAAGAAGAAGAACAAGAAGAAGAAGAAGAAGAGCTGGATCGAAACAGCAATATGGATCTTCCTGGAGATGAT GAAGATCTGAGGAGGAGTAGGAGGAGGCGAGAGGTTCTTCGTCTTCGAATTAGGGATTTGGCGATGCGAACAAGGAGCATGAGGAATCGGATATTGGATT GGTCTGATATTCTGTCTGGTCTGGATGATAATTCGATTCAGTTTCGTCTTCAGGTACCGGAGTCTGATCGATACGTCGGGAATCCGGAGGATTACGTCGA CGCGGCTGAGTACGAGGCGTTGCTGCAGACACTGGCGGAGACAGATGGTGGTGGGAAGAAGGGAGCACCTCCGGCTGCGAAGTCCGCGGTGGAGGCGTTG CCGACGGTGGAGATCGTGTCGGAGAAGGAGGTTGTGGCGTGTGCTATCTGTAAGGATATGGTTGGTGTTGGTGATGTGGCGAAGAGATTGCCGTGTGGGC ATCAATACCATGGAGATTGCATTGTTCCTTGGTTGGGTTCAAGAAATTCATGCCCTATTTGTAGGTTTGAGCTTCCAACTGAAGATAAGGAATATGAACA ACAGAGGAAGAATAAGAAGGTGATGAATAGTTCTTCAAATGGAGCTTCCGGTTCGGGTGGTGGATCGGGTTGATTTCGTTCAATCTGGTATGTTATGTTC AGTTCTGCTGTGCCATTTGTGTAATATAATTTGGTGCTTTTTATCTTCTGTCAACTTTTTTTATTCCCCTTTTTGTAACAAAGGTTGCATAATGTTATTT ATATGAAGCTTCATGGAGTTGAATTCTTAGCTGATGCTCTCAGATCAATGTATATAGTCTCTTGTATAACACTACTTCAACAGAATTTGCATTTTTTTGA ATAATTTTATGCCTGTCCTTTTGTTGTGGTCATTTTTTGTTGCTGGATTTGTGGTATAATCCCATGGATTAAACACTGGTTTAGTGAAATTGATCTTGGT CGATTTTGTCTCTCTTCGGATTAGTTATCGTTGGACTTGTGGCAAGTAGCCTCGGAAAGTTATCTGTAGTAACAAGCTCTATATACTTGTGTGAAATGAC AAATAGTTTTGAAGTTACTAGTTAGCAAAATCTGAAGAAAGATCAAGTATTAGAGAGAGTGCATTTACATAGATATCTTGATGGATCTCTCACTACAGAA AGCAACTTTATCGGTAGATATGAACCGGATGTGGTTGATAAGTAGCACTGCAATGCTTTCAGCAGCTTCTTTTCATGATTAACACTAAACAGTTGCACAA AAACTTTCCTTACTCCACCAACTTGAAGAATTCTGGCTCCCAAGCGGAATTTCCCTTTCACTTATCTGTTATCTTTGTCCCCAATCTCACTGCATATCAC AGTAGCAGTTTCAAGCCATCAGGACAAAACATGATTCTATTTTCAAATCATGACAAACTAGGCATCATACATAGTCATACAGAGCATACTCTGCATCTTG CAACTAAGCAAATGAAATATCAGCCTCTCAAGATTAAGTACCCCGTTCTCGGAATCCATGTGCAACATTGTCAGCTTTTCTCCCAAACTTAGTCATTCTA GTCTGAACTGATTGATGATTTTGAGAAGTATCAGGTACCATGGATGTGGAGGAACTTCTTGTATACCAACTAGCTTATGAGAAGTATTCAAGATATCTTC TCACTTTGGTTGATGAGCCCTTATAAACCACAGGTATATATATGGTTAAAAGGGAACATGGTGATTATTTAATCTTTGTAGGATGAGTAAGCTATGGATC ATCATGACCAAAGGAAACATATAAGCAACCATTTAATGTTTTATGGAAAAGGATCATAATTCATAACAGATGTTCCTTTTGCATCTCTTCTGTTTTGTGC CTTGAAAGGGAAAACAAATTTGAAGGGGAAATGATATAATACTTTATAGTATATAGTAGTGATTTCCATTCCTTTGGACAGCTACAGAAATTTTCAAGAT TGATCATTTCAGAAAAAATAGTGATGATACATGTATATTGTGACCCAAAACTATTTAGTGAGGGTTGAACACAAACTTTCAGAAAAATATTTGTTAAGGA CCCTATAACTATAAAGACTTTGCTGGGTACAGGATTTAACTTCCATGGTTACGAATATGATAAGGGTCTAAGGGTGTTAGGGTATCATAATTCTTCATCC CACTGTTTCACCAGTTATTTTACATGATTTTGTTTATGGAAAAAAACTTGATGATGATATGGTTGCATTTATTCGTTATTAACTATGATTCCATATTAAG CTTGAAAGGTATAAATTGTTCTATCCATTCAAAGTTCTACAACTATTCTCTATATTTCTTATTTCTTTAATTACAAGGCTTATATTTTTAGAAAGATAAG TTTAACATCAATCATTTTATGGAAGTATCCAATATTGAACCCAGATCCTAATTCAAATTTCATTTCACAAAAAACACTTCAACTGGTTGAGACTTTGTTT GATGTTACAACGAAGAAAGTAGAAAGTAAAATTGTAATTTTGAAGAGTCACAATTTAAAAATTGAAAATGAAAATGGAAATTAAAGATTCTTGATTGAAG TATCCAACACAATAAGATATTGTTAGATTTTGATTTTTGATGAATGCTTGAATGGACAAATCTTCATTATTTATTTAGTTTAAAAAAATATTTACCAAAC ACTCCACCCACCGCCACCGCCACCACCGTCACCGCCGTCTCATACTCCGTTCCAACTTCACCCTCATCCTGAACTCGTTCTACATGACTCAGTACCTGAC CATGAGTCACAGACCGAGTGGGAGGATTACTTGAATGACGAGGATAAGTTTAATGTTACTCAGAGATTGGTTGTGTTATTCCCCAAGGTTGATGTGGATC CCATAGATGGGTTTGTTACTGAGAACGAGTTGACTCACTGGAATGTTCATCAGGATCAAAATGAAGTCTTGCATAGAACAAAAAGGGATTTTGAACTTCA TGACAAGAACCATGATGGTTTTGTTTCATTTTCTGAATATCATCCTCCTAGTTGGGTTCAAAGTTCAGGGAAAGAGATACGGATAAAGATGGGAAGGTCA ACTTTAAGGAATTTTTCCATGGGATCTTTGATTTGGTAAGAAACTATG
• Tissue: flowers
• Gene name: LI_gene_63212;
• Additional information: details;

Expression of Ll_transcript_189501

FPKM

• FPAB: 6.3
• FPNAB: 3.6
• LF1: 3.8
• LF2: 5.7
• LF3: 4.7
• LF4: 4.7
• UF1: 4.8
• UF2: 4.7
• UF3: 5
• UF4: 5.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_189501

• Blastp: E3 ubiquitin-protein ligase CIP8 from Arabidopsis with 60.61% of identity
• Blastx: E3 ubiquitin-protein ligase CIP8 from Arabidopsis with 60.9% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT5G64920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452604.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;