Ll_transcript_188007

Id TrinityFTRINITY_DN56797_c4_g1_i16
Name TranscriptLl_transcript_188007
SequenceCAACTTTATATTATCTTTCACCATAAATAAATAAATACATACATTAATCTTTGCATTTGTTCTATTATATAAGCTTAGAGGAAGTTGGGTAACGGTTAAC TTCCCTCCAAACCTTGTTTCTACTTTTATTTTGTTGCTAAAACCTTCTGCTTGGTGCAAAATATCTTTCAATTAAGGTGCTTGTTCAATTTGAAGTTCTC TCTTATAAAACTAACTTTTATTGTGGAATTTCAGAAATACTGGAGCTTATTTTATAAGAATCACACAAGACTTGATTTCTGATACTTGTCTTTCAAGTTT GGAACTTTTTTATTATAGACGAAAGGGGTATCCTTAATTTGTTTATGTGAAGCTTGATTCAATTCCTGATTCCTAAGAGAAGATTATTCCAATGAATTGT AGGTGCTCCTTACCACCAGAGTCCTTGTTTAATTCAAGCAGCATGGTTTCATTATCTTCAAATTCTGCAGCAGGAGAAGAAGGTAGAGTGGTTAGTGATC TAAATAGGCCTCTATCACACACCTTGGCACCTTCTTTTTGGATTCGGATGGCTATGAGAATATCTAGAGCAAGGTGGTTTGGGTTCTTAAGAAGAGTATT TCATTACCAAAATGGACCAAGCTCACACCATGGTACTAACCCTTTCGATTCTAGCACATGGATGATGCTGGAGTTCATTGCTTTGGTGGTGCAGATAATT ACTACAACATCTACTTTGGTCATTTCAAAGAGGGAGAGACCTGTTTGGCCTATGAGGATTTGGGCAACTAGTTATGATATTGGTTGTGTTCTTAATCTGC TGCTACTTTATGGCCGCTACCGTCAAATATATTTGATTCCAGGAGATACTCTTCACCTTTCTCATCTGGAACATCAGAGAAACAATGAAGAAACCAGGAT TCCACATTTAATGAATAAGTGCAAGACTTCAGTTGAGCTTTTCTTTGCCGTATGGTTTGTGATGGGCAATGTTTGGATTTTTGAGTCATCACGTTTTGGA TATTTCAATGAAGCTCCAAAGCTTCATGTGCTCTGCATCACCTTACTTGGTTGGAATGCAATCTGCTATTCTTTCCCTTTCCTACTGTTTCTGCTCTTAT GTTGCTGTGTGCCACTTATTAATCGCCTCCTCGGATACAACATGGTCTCTTCTGATAAAGGAGCAACTCATGATCAAATTTCACAACTCCCAAGTTGGAC ACATCAACAAGTTCATACCAAGTTAGAGCTTGGCAATGATACAGAAGGCTGTCACAAATTGATTAATCAAGATCCTGAATGCTGCATTTGCTTAGCCAAG TATAAAGAGAAAGAAGAAGTTAGAGAATTGCCCTGTTCTCATATATTCCACCAAAAATGTGTGGATCAATGGCTAAAAATTATATCCTGTTGCCCTCTTT GCAAACAAGGATTAGAGAGGACAAAATAGTTTGAGACTTATTTGGTGATATACACTCTTGATGTTACCCACATTGGCCATATCATATGTATACTTTCCAA GGGTTACTAGAGTGAGTTTGTACATGTATATATAATAGCTCACCAGTTACCAAAACTACACTCAATATTTGGTTAAGGAGTGGATTGCATAAATTAGTTA TACATATATGTTGTAATGGAGGTGTAACAAGGTTAGGGTTGTTTGATATTTGAGTAAACAGATATGGACTCTATTTGTGTAAAGACTAAAAGTATGTTGT GTGTATACAATGTAAAAAAAGAATGAAAAACTGAAAAGTAGCACTAAATCATGGAAAGTGTGAATTTAACAAAATTTATAATAAGTGCATCCTTGCTCTA TTATTGCATGAAGGGGTTTGGTATCATATCTCTTTGTCACCAACAACAACACCTCATCAACCTGTCCCCACAACATATTCATGCACTGCTCACCCACCAC CGCATGTCTATTCATTCCAAATTAGTAATACAATGAACCACATTCAAATTCATTTATTTATTGGTAAACATAAATTTTCTATTAATTTTCATTATTGATA TATTTTGTGCAAGCTGTATTATGTGTCATCAATCATCATCATCATCTTCATTCAATTGCACTTATTATTATAATTATTCTTCATAATAACTCTAACCTTC TCTGCACACTCTACTTCCAAGGTAACAACGCCTCTCTTCACCTTTCTCTTCACTAATCTGATTAATTCTTAACTGGGCTTCTTCACCCTTCATTAAATTT CTAATCTTTTTCTTCCTTCTTCTTCCTCTGTTGCTACTTTATTGTAGATCCATGAGTTGGTGAAGGAGAGATGTAACTAGTTAATTTTTTGTAGGATTAT TTTTGTAATCACCACGAGTGAGTGGTTGGGTTCTATCTTCTATGAACACTTGGATATTATATTAACTGCTTTAACTGTTTCAGTTCAAGGAATTAGTGTG TCTTCAGGCATCAAGTACCAGATTTTGCTCCCACTGGTGCCTCCAAAAATTTGACAGATCTTGGCATTTGGGATAGATCAACTGAACTTGGAAATGGTTA AAAGTTATGGAATGTTCTGATTTGCTTGAGATACTATCATGTTGCAGTGCATAGAGGGAATTTTGCATCTATTTTATCCAATATTGCGATGTTGTGACCT TGACTTAAATAAGCAGCAAACAGGCCTCAAAGATCCTGAAGTTCTTGCAAGGGAAACAGTGTGTATGAATCAACCTTACTTTATGATTATGAACATACTG TTGTTACTTCTGTTTTTATACAAATGATGTGATCGGTTACTCTAGAACCTTTTATCTTGTGTTATCCCCTTTGGGTTTTGAAACTGTGATCAGTGATGTT AAATAAGAAAGAAAAGAAACCACAGTATGTTATTATCTTCTTTGTGTTTCTGGATTTTATTATCTGTCATACTTATTATGAAATAGATGCACATTATTTG GGCCGATGACAACTGTTAGTTTTGCAACCATATGCAGTCAGTGTAAGTGAAATCGAAGCACTTTATGAGCTCTTTAAAAAGATCAGCAGTGCTGTGATTG ATGATGGGCTGATTAACAAGG BLAST
Tissueflowers
Gene nameLI_gene_63241; 
Additional informationdetails; 

Expression of Ll_transcript_188007

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_188007
BlastpE3 ubiquitin-protein ligase At4g11680 from Arabidopsis with 30.15% of identity
BlastxE3 ubiquitin-protein ligase At4g11680 from Arabidopsis with 29.78% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (AT4G11680)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019456046.1)
PfamRing finger domain (PF13639.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;