Id Trinity | FTRINITY_DN56797_c4_g1_i17 |
---|---|
Name Transcript | Ll_transcript_188008 |
Sequence | CAACTTTATATTATCTTTCACCATAAATAAATAAATACATACATTAATCTTTGCATTTGTTCTATTATATAAGCTTAGAGGAAGTTGGGTAACGGTTAAC TTCCCTCCAAACCTTGTTTCTACTTTTATTTTGTTGCTAAAACCTTCTGCTTGGTGCAAAATATCTTTCAATTAAGGTGCTTGTTCAATTTGAAGTTCTC ATCTTATAAAACTAACTTTTATTGTGGAATTTCAGAAATACTGGAGCTTATTTTATAAGAATCACACAAGACTTGATTTCTGATACTTGTCTTTCAAGTT TGGAACTTTTTTATTATAGACGAAAGGGGTATCCTTAATTTGTTTATGTGAAGCTTGATTCAATTCCTGATTCCTAAGAGAAGATTATTCCAATGAATTG TAGGTGCTCCTTACCACCAGAGTCCTTGTTTAATTCAAGCAGCATGGTTTCATTATCTTCAAATTCTGCAGCAGGAGAAGAAGGTAGAGTGGTTAGTGAT CTAAATAGGCCTCTATCACACACCTTGGCACCTTCTTTTTGGATTCGGATGGCTATGAGAATATCTAGAGCAAGGTGGTTTGGGTTCTTAAGAAGAGTAT TTCATTACCAAAATGGACCAAGCTCACACCATGGTACTAACCCTTTCGATTCTAGCACATGGATGATGCTGGAGTTCATTGCTTTGGTGGTGCAGATAAT TACTACAACATCTACTTTGGTCATTTCAAAGAGGGAGAGACCTGTTTGGCCTATGAGGATTTGGGCAACTAGTTATGATATTGGTTGTGTTCTTAATCTG CTGCTACTTTATGGCCGCTACCGTCAAATATATTTGATTCCAGGAGATACTCTTCACCTTTCTCATCTGGAACATCAGAGAAACAATGAAGAAACCAGGA TTCCACATTTAATGAATAAGTGCAAGACTTCAGTTGAGCTTTTCTTTGCCGTATGGTTTGTGATGGGCAATGTTTGGATTTTTGAGTCATCACGTTTTGG ATATTTCAATGAAGCTCCAAAGCTTCATGTGCTCTGCATCACCTTACTTGGTTGGAATGCAATCTGCTATTCTTTCCCTTTCCTACTGTTTCTGCTCTTA TGTTGCTGTGTGCCACTTATTAATCGCCTCCTCGGATACAACATGGTCTCTTCTGATAAAGGAGCAACTCATGATCAAATTTCACAACTCCCAAGTTGGA CACATCAACAAGTTCATACCAAGTTAGAGCTTGGCAATGATACAGAAGGCTGTCACAAATTGATTAATCAAGATCCTGTAAGTCACACCATTCTTAATAC AAAGAATTAGTAATCTACTCATACAAATTTTGCTTCAATTTGTATATTGAATTAATAAATTTGTTCTGATTTGGTTGGTTCCAGGAATGCTGCATTTGCT TAGCCAAGTATAAAGAGAAAGAAGAAGTTAGAGAATTGCCCTGTTCTCATATATTCCACCAAAAATGTGTGGATCAATGGCTAAAAATTATATCCTGTTG CCCTCTTTGCAAACAAGGATTAGAGAGGACAAAATAGTTTGAGACTTATTTGGTGATATACACTCTTGATGTTACCCACATTGGCCATATCATATGTATA CTTTCCAAGGGTTACTAGAGTGAGTTTGTACATGTATATATAATAGCTCACCAGTTACCAAAACTACACTCAATATTTGGTTAAGGAGTGGATTGCATAA ATTAGTTATACATATATGTTGTAATGGAGGTGTAACAAGGTTAGGGTTGTTTGATATTTGAGTAAACAGATATGGACTCTATTTGTGTAAAGACTAAAAG TATGTTGTGTGTATACAATGTAAAAAAAGAATGAAAAACTGAAAAGTAGCACTAAATCATGGAAAGTGTGAATTTAACAAAATTTATAATAAGTGCATCC TTGCTCTATTATTGCATGAAGGGGTTTGGTATCATATCTCTTTGTCACCAACAACAACACCTCATCAACCTGTCCCCACAACATATTCATGCACTGCTCA CCCACCACCGCATGTCTATTCATTCCAAATTAGTAATACAATGAACCACATTCAAATTCATTTATTTATTGGTAAACATAAATTTTCTATTAATTTTCAT TATTGATATATTTTGTGCAAGCTGTATTATGTGTCATCAATCATCATCATCATCTTCATTCAATTGCACTTATTATTATAATTATTCTTCATAATAACTC TAACCTTCTCTGCACACTCTACTTCCAAGGTAACAACGCCTCTCTTCACCTTTCTCTTCACTAATCTGATTAATTCTTAACTGGGCTTCTTCACCCTTCA TTAAATTTCTAATCTTTTTCTTCCTTCTTCTTCCTCTGTTGCTACTTTATTGTAGATCCATGAGTTGGTGAAGGAGAGATGTAACTAGTTAATTTTTTGT AGGATTATTTTTGTAATCACCACGAGTGAGTGGTTGGGTTCTATCTTCTATGAACACTTGGATATTATATTAACTGCTTTAACTGTTTCAGTTCAAGGAA TTAGTGTGTCTTCAGGCATCAAGTACCAGATTTTGCTCCCACTGGTGCCTCCAAAAATTTGACAGATCTTGGCATTTGGGATAGATCAACTGAACTTGGA AATGGTTAAAAGTTATGGAATGTTCTGATTTGCTTGAGATACTATCATGTTGCAGTGCATAGAGGGAATTTTGCATCTATTTTATCCAATATTGCGATGT TGTGACCTTGACTTAAATAAGCAGCAAACAGGCCTCAAAGATCCTGAAGTTCTTGCAAGGGAAACAGTGTGTATGAATCAACCTTACTTTATGATTATGA ACATACTGTTGTTACTTCTGTTTTTATACAAATGATGTGATCGGTTACTCTAGAACCTTTTATCTTGTGTTATCCCCTTTGGGTTTTGAAACTGTGATCA GTGATGTTAAATAAGAAAGAAAAGAAACCACAGTATGTTATTATCTTCTTTGTGTTTCTGGATTTTATTATCTGTCATACTTATTATGAAATAGATGCAC ATTATTTGGGCCGATGACAACTGTTAGTTTTGCAACCATATGCAGTCAGTGTAAGTGAAATCGAAGCACTTTATGAGCTCTTTAAAAAGATCAGCAGTGC TGTGATTGATGATGGGCTGATTAACAAGG BLAST |
Tissue | flowers |
Gene name | LI_gene_63241; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_188008
Blastp | E3 ubiquitin protein ligase RIE1 from Arabidopsis with 21.28% of identity |
---|---|
Blastx | E3 ubiquitin-protein ligase At1g63170 from Arabidopsis with 52.83% of identity |
Eggnog | zinc ion binding(ENOG41121N2) |
Kegg | Link to kegg annotations (AT2G01735) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456046.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |