Id Trinity | FTRINITY_DN56797_c4_g1_i3 |
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Name Transcript | Ll_transcript_187992 |
Sequence | CAACTTTATATTATCTTTCACCATAAATAAATAAATACATACATTAATCTTTGCATTTGTTCTATTATATAAGCTTAGAGGAAGTTGGGTAACGGTTAAC TTCCCTCCAAACCTTGTTTCTACTTTTATTTTGTTGCTAAAACCTTCTGCTTGGTGCAAAATATCTTTCAATTAAGGTGCTTGTTCAATTTGAAGTTCTC ATCTTATAAAACTAACTTTTATTGTGGAATTTCAGAAATACTGGAGCTTATTTTATAAGAATCACACAAGACTTGATTTCTGATACTTGTCTTTCAAGTT TGGAACTTTTTTATTATAGACGAAAGGGGTATCCTTAATTTGTTTATGTGAAGCTTGATTCAATTCCTGATTCCTAAGAGAAGATTATTCCAATGAATTG TAGGTGCTCCTTACCACCAGAGTCCTTGTTTAATTCAAGCAGCATGGTTTCATTATCTTCAAATTCTGCAGCAGGAGAAGAAGGTAGAGTGGTTAGTGAT CTAAATAGGCCTCTATCACACACCTTGGCACCTTCTTTTTGGATTCGGATGGCTATGAGAATATCTAGAGCAAGGTGGTTTGGGTTCTTAAGAAGAGTAT TTCATTACCAAAATGGACCAAGCTCACACCATGGTACTAACCCTTTCGATTCTAGCACATGGATGATGCTGGAGTTCATTGCTTTGGTGGTGCAGATAAT TACTACAACATCTACTTTGGTCATTTCAAAGAGGGAGAGACCTGTTTGGCCTATGAGGATTTGGGCAACTAGTTATGATATTGGTTGTGTTCTTAATCTG CTGCTACTTTATGGCCGCTACCGTCAAATATATTTGATTCCAGGAGATACTCTTCACCTTTCTCATCTGGAACATCAGAGAAACAATGAAGAAACCAGGA TTCCACATTTAATGAATAAGTGCAAGACTTCAGTTGAGCTTTTCTTTGCCGTATGGTTTGTGATGGGCAATGTTTGGATTTTTGAGTCATCACGTTTTGG ATATTTCAATGAAGCTCCAAAGCTTCATGTGCTCTGCATCACCTTACTTGGTTGGAATGCAATCTGCTATTCTTTCCCTTTCCTACTGTTTCTGCTCTTA TGTTGCTGTGTGCCACTTATTAATCGCCTCCTCGGATACAACATGGTCTCTTCTGATAAAGGAGCAACTCATGATCAAATTTCACAACTCCCAAGTTGGA CACATCAACAAGTTCATACCAAGTTAGAGCTTGGCAATGATACAGAAGGCTGTCACAAATTGATTAATCAAGATCCTGAATGCTGCATTTGCTTAGCCAA GTATAAAGAGAAAGAAGAAGTTAGAGAATTGCCCTGTTCTCATATATTCCACCAAAAATGTGTGGATCAATGGCTAAAAATTATATCCTGTTGCCCTCTT TGCAAACAAGGATTAGAGAGGACAAAATAGTTTGAGACTTATTTGGTGATATACACTCTTGATGTTACCCACATTGGCCATATCATATGTATACTTTCCA AGGGTTACTAGAGTGAGTTTGTACATGTATATATAATAGCTCACCAGTTACCAAAACTACACTCAATATTTGGTTAAGGAGTGGATTGCATAAATTAGTT ATACATATATGTTGTAATGGAGGTGTAACAAGGTTAGGGTTGTTTGATATTTGAGTAAACAGATATGGACTCTATTTGTGTAAAGACTAAAAGTATGTTG TGTGTATACAATGTAAAAAAAGAATGAAAAACTGAAAAGTAGCACTAAATCATGGAAAGTGTGAATTTAACAAAATTTATAATAAGTGCATCCTTGCTCT ATTATTGCATGAAGGGGTTTGGTATCATATCTCTTTGTCACCAACAACAACACCTCATCAACCTGTCCCCACAACATATTCATGCACTGCTCACCCACCA CCGCATGTCTATTCATTCCAAATTAGTAATACAATGAACCACATTCAAATTCATTTATTTATTGGTAAACATAAATTTTCTATTAATTTTCATTATTGAT ATATTTTGTGCAAGCTGTATTATGTGTCATCAATCATCATCATCATCTTCATTCAATTGCACTTATTATTATAATTATTCTTCATAATAACTCTAACCTT CTCTGCACACTCTACTTCCAAGGTAACAACGCCTCTCTTCACCTTTCTCTTCACTAATCTGATTAATTCTTAACTGGGCTTCTTCACCCTTCATTAAATT TCTAATCTTTTTCTTCCTTCTTCTTCCTCTGTTGCTACTTTATTGTAGATCCATGAGTTGGTGAAGGAGAGATGTAACTAGTTAATTTTTTGTAGGATTA TTTTTGTAATCACCACGAGTGAGTGGTTGGGTTCTATCTTCTATGAACACTTGGATATTATATTAACTGCTTTAACTGTTTCAGTTCAAGGAATTAGTGT GTCTTCAGGCATCAAGTACCAGGTTCTTTGTTTCATAAGGAATTTCATAAGCTTAATAAGAAAACAATTATTCTCCTGGATAATCATAGAACTCGTTCTT TGCTGTCAAGTACTTTTTAATATCAGAATCTGATGGATATTTTACTTCAATTATTGTGCCAGATTTTGCTCCCACTGGTGCCTCCAAAAATTTGACAGAT CTTGGCATTTGGGATAGATCAACTGAACTTGGAAATGGTTAAAAGTTATGGAATGTTCTGATTTGCTTGAGATACTATCATGTTGCAGTGCATAGAGGGA ATTTTGCATCTATTTTATCCAATATTGCGATGTTGTGACCTTGACTTAAATAAGCAGCAAACAGGCCTCAAAGATCCTGAAGTTCTTGCAAGGGAAACAG TGTTCAGTGTAAGTGAAATCGAAGCACTTTATGAGCTCTTTAAAAAGATCAGCAGTGCTGTGATTGATGATGGGCTGATTAACAAGGAAGAATTTCAACT GGCATTATTCAAGACAAATAAAAAAGAGAGCTTGTTTGCTGATCGGGTATTTGATTTGTTTGACACAAAGCACAATGGGATACTCGGTTTTGAAGAGTTT GCTCGTGCTCTCTCTGTCTTCCATCCAAATGCCCCTATTGATGATAAGATTGGATTTTCCTTTCAATTATATGATCTCAAGCAGCAAGGTTTTATTGAAA GGCAAGAGGTGAAGCAAATGGTAGTTGCCACACTTGCTGAATCTGGCATGAACCTATCAGATGATGTTATAGAGAGTATAATTGACAAGACTTTCGAGGA AGCGGATACGAAACATGATGGCAAGATTGACAAGGAGGAGTGGAGAAACCTTGTTTTACGCCATCCTTCACTTTTGAAAAACATGACCCTTCAATATCTC AAGGACATCACCACAACATTCCCAAGCTTCGTATTCCATTCACAGGTAGATGATACCTGAAGCTTCTATTATTTACTTCATCTTTTCAGAGACTCCTCTT ATGTAAAAAAGGACATATCAGGGAGATTCTTTTATTTTTTATGAAAGTGGTTTTATATGGTTTTGTTTAGGATTCATTTCAGTGGTGCAACCTTGTTCAA ATACATATTATTTATTGCTTCAAACACCCTCATGTTCATTCCTGTTTCTATTCATAGTGACTGAAAATATTGCAATGTCAATGACCAAACTAATATTTTG ATTATAATGGTTGATGATATTAATCTCAAAGATCAAGTTGACCGGTT BLAST |
Tissue | flowers |
Gene name | LI_gene_63241; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_187992
Blastp | Calcineurin B-like protein 3 from Oryza sativa with 91.59% of identity |
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Blastx | Calcineurin B-like protein 3 from Oryza sativa with 91.59% of identity |
Eggnog | Calcium-binding protein(COG5126) |
Kegg | Link to kegg annotations (4333502) |
CantataDB | Link to cantataDB annotations (CNT0002341) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456046.1) |
Pfam | EF-hand domain pair (PF13833.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |