Id Trinity | FTRINITY_DN56802_c0_g2_i15 |
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Name Transcript | Ll_transcript_9610 |
Sequence | GAGTCATCGTAAATGTTTGGGAATAAAGTTTTTTTTTATCGGCAATTTTTTAGAATGTAAATGTTAGTATTTTATTGTGGGTGACACACCACCTCAACCT CTTTCATTCTAATTATCAAATTACGTTATATCTCCTCGGTTGGGAATAAAGATTGAAGATGGTAGAATAAAACTTTGTTTTGAAGTGACTTCAGTTGAAC TCTCTGAAATAAACAACCCCACCTGCCACCTCACTCTCTTTCGTGTCATTACATCCACTCAACTTCCCATACCCACTCTTTCATCAAACCATTGACTAAC ATCAACGGTTCAAAACCTATCAACTCATCCAATCCAACGGTGTCAACGAGCTTTCAACACCTCGTGATTTCCCCACAACTTATCCAACCTCTTTTCATAT ATTCTTATTTTCAAAAGAGATAAAAATAAATAGACTGACAGTATATTATTATTGATTTTTTCTATTATTGTTGACTTGAAAAAGCAATTTAAATGAATGA TAGATGATAAAATGCATATAAATAAATGTTTACGCTCTTTTAAAAAATATTTTGAGTGTTCCAGCTAGCAAAGTTTACAGAGTGAACAACACAAGGTAAC AAAATAAATGCACCTTTAGATCTCTCTATCTCTCTCTATCTCTCTCTTCCATGGTACATTCTCCACTCTTCTTCTCTCTACTCTTCTTCTCCACTCCATT GTAATATATTTTAATATTACTTTGATTTTGTAATCTCATAGTTTTGGCTGTGCTTGACAGGAATAGTAAGTAGATTCGAGGTTCCACATTGCTTAGGATC TGGTCTCGCAATGGGGAAGTCACCGGCAAAATGGATAAAAAATGTACTGTTTGGAAAAAAGTCATCCAAATCAAATGTTTCAAAAGGAAGAGAGAAACTT GTTAACCAAACAGAAGGAGTGGTTCCTTCAAAGTTGTCAGAAACTGGTTTGGCTTTAGATCCGACCCCAAATATTAATGCCAGAAATGAGGAAGACCCAC GACTGCAGGATAAAGAAGCAGAAAATGTTTTACCTGGAAGTCAAGAAATAGACACAGTAGAATCTGTTCAACAAGATGCTCCACTTGATCCAGAGAAAAT AAGGCTGGGGGAAGCAGCAACAAAGGCACAGGCTGCATTCAGAGGTTACTTGGCTCGACGGGCATTTAGGGCCCTAAAAGGCATAATAAGGTTGCAAGCA CTTATTCGTGGGCACCTGGTTAGGAGACAAGCTGTCGCCACATTATGCTCTGTGTATGGGATTGTCAAGTTACAAGCACTTGTTCGTGGAAGAAGAGTAA GACTGTCTGAAGTTGGATTTGAAATCCATCAGAAGTGCACTCTATTGAAACCTCTGGATGGCAAACATGTCATGCCAAATGATATATCTACAAAAATTAT GAAGCTGTCAGCAAATGCTTTCATCCGTAAGTGAGCGAGGCCAATCTTCTGACGGAATGAGACAGTACTGACCTACTAAGTTTTCTCAACGGGGAATTAA GTTCCAAGATTGCAATTATTTGCTATACGAACATTATTAGTTTCATCAGATAACGGTATCTTTTATTTATGCAATACTAAACCAGAAAATTATTCCATAA TAACTATACTTCCCTTCTAAGTCCTGAATTACAGAACTTCAACTGATGAGCATGTTTAGTTTTTATGTGGCACCTCAGGGCTAGGCAATTTCTTTCTTAA TTACTTCAGTAATTCATTGTTGACATGAAGATGTGAATATATCCTACCATAATTTTAGTTTGGTTAAATCTGCAATTGAATTGGTTTCTTTTCACATATA TTGTTTTACCAACTTTCTGGAGCACATACTTATATACGCCTTGACTGTCAGTTAAAGTGTTCATGTAAAAACGTTGCTCTGTTGTTTCAGCTTCTTGCTT CATCTATTATAATAATGCCCCTGCATTTGCAATATGTTCCTGGTGATCCAAATTCAGTCCTGAGTTGGTTGGAGCGCTGGTCAACATCTCACTTTTGGAA ACCAGTTACACAACCCAAGAAAATTCGAGACATTAAGTCTCAGAGAAAGCAAGATAATATTTCAATTGGGGAAGCTCAAGTGAGCAAATCGAAACGTACC AACCGGAAGTTTCCTACTTCAAATTTTGACTCGGTTCCAGTGCAACCAAATCCTGAACTTGAGAAACCAAAACGGAACTTTCGGAAAATTTCAAGCCAAT CCTCAGATCCTGTGCAGGAAAATCCACAAATTGAGCTTGAAAAGATTAAGCGAAACTTGAGAAAGGTTCATAACCCAGTTGTTGAGAATAATGTCCCGTC AGAAGTTGAGTCTGAGACCTCAAAGCAGCATTTGGAAAAGGCAATGGTTAACTCTGTTCATGTTGGTGTTTCAGAACAAGGGATTATGAGTTCCAATGAG AAGATCAAGAAAGAAGCAGCATTAACCATTTCCAGTGTTCCTGATGTAGAAGTCCCTCCTATACTTACGGTTAGTAAGGAGGTATCTGACACTCCTAGCA GTTATCAAGTGGGTGTTGAATCAAATCCCTTGACAGAGATTACAAGTAAAGATGAAAATATTTTTGATAATGAAGTAAAGAATGAGCCAATCGATTTACC AGAGACTGTTTATAAAGATATAAGTTCTCACTTAACAAATGGAGATTTGAGTCACAAGGAAGATCCAACTGGAAGTGAAAACTTGAAACCAACCCGTAAA GCCACGCCTGTAGTAAAGCAGGAACGTGCAGAAAATGGTTCACAGGATAGTCCAAAATTACCTAGTTATATGGCAGCAACTGAATCTGCAAAGGCAAAGT TAAGGGCACAAGGATCCCCAAGACTTGGACAAGAGGGAAGCGAAAGAAATAACACTGCACGGCGACAATCTCTGCCATCTTCAACTAACAGCAAAATTAG CTCTCATTCACCTAGGACACAAAGGCCAGTTGAAGTTGGTGGCAAAGGGGGGCATAAAAGTGACAAAGCTGTATCATCTTCTAGAGAAGGGAATGGTAAG GTAGTTCAAGCAGAATGGAAGAGGTGATTTGAGGAAGACTGGTTTTCAGGAGTTTAACATGAGGATGTTGAAACTTGAGTGAGGCTTTTATGTTATATGT ACCTTTGATGAAAATTGCTGGATTTATAGGACTATATAATAGGTTTGTTTAATCATGTTTTCCTTAATTTGCTGCATTTTGGGCGTTTGAGGGTGATTTG TACATTATAGGTTTAGTTTTGCATGATTCAACAACTTTACCTTAATTAAGTTGTTTGTTTTCGAAGTGATTTTTGGCTTGTCCGTATTGTTTGTTGTTTC TTTCTTCCCAAGTGTGTATGTTTTAGATGAATACCAACTTTAATTCTTGTTGCCCAATGAAGTGGTTTAGCGCCCCCAATTTGGGCCTCACATTCCTGTA CTGAATTGTCCATCACAGGAGAGGATCCAAACTCATCAATACATCCCTTATA BLAST |
Tissue | flowers |
Gene name | LI_gene_63261; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9610
Blastp | Protein IQ-DOMAIN 31 from Arabidopsis with 43.86% of identity |
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Blastx | Protein IQ-DOMAIN 31 from Arabidopsis with 42.68% of identity |
Eggnog | IQ-domain(ENOG410YAVA) |
Kegg | Link to kegg annotations (AT1G74690) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463745.1) |
Pfam | Protein of unknown function (DUF4005) (PF13178.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |