Ll_transcript_10541

Id TrinityFTRINITY_DN56804_c6_g2_i7
Name TranscriptLl_transcript_10541
SequenceCAAAGTTTACAGCACAATCCCATCAAAATAAAATAATCCTTCCAAGAAGATGATTGGTTCAGCTAAGTTGCTTCAAGGTCTCTGTGTGCTTGATCTTGAT CATAATAAATCACCTACACATACCATCCTTAATATTCACAACACTGTAAAGAAACCTGTGCAATTTTCACTCTGACACAAAGGATTGGGACATGTATCTC ATTATGTATTAGCCCTCCTTTGTAAACAATATCATTCTTTACATATACATAATAAAGACGATTCTCCTTGTGATATCTGTGATATTGCAAAGCAGAGGAA GTTGTCATCCCCTCTTAGCATAACTCATAGCACTGCACCCTTTGCTCTTCTACATGCAGACATATGGGGTCCTTACTCTACCACATTTATGTGTGGTCAT AAATACTTCCTTACTTTGGTAGATGATCATACATGATTTAGTTGGGTTATTTCTATGAAAACTAAAGCAGAAACCAGATTATATCTTATCAATTTTATGG CCTATATTGAAACTCAATCCAGTACCAAGCTCAAGTGCCTAAGAACTGACAATGGTATTGAATTTCTAATGCATGATTTTCTTGCTTCAAAGGACATTGT CCACCAAAGAACATGTGTCGACACCCCTCAATAAAATGGTGTTGTTGAAAGAAAACACAAACACATTTTGAATGTGGTTAGAGCTTTGGTTTTCCAATCT CACTTACCTGCAATATTATGGACCTTTGTTGTCCAGCATGCCATTAACACTATCAATAGACTATCACGTCCTCGTCTTAAAAATAAAAGCCCTTTTCATA TTATGTTTTATGAATTACCTAACTTGTTTCACTTAAGAGTGTTTGGTTGTTTAGGTTTTGCAAACACAATCACTACACATAGAACAAAGTTTGATCACAG GGCCAGAAAATATGTTTATCTTGGATATAAAGATGGCACAAAAGGTTATGTTTTATATGATTTAAATTTCCATGCTTTATTTCTTTCAAGACATGTTTTT ATGAGGATTGTTTTCCCTTTCATACTCAAGTTGTTGCTACTCCTACAACCTCAAACATTGTTCCTTCCTCCACCCCTCTGCCATCCTACACTCCACCTAT CCCAGACCATGATTCATGCATCCCTATCCCTCCCACCACTGATCCTTCTCCTCCCACTATTAAACATTCCCCGAGACCGAAGAAACCCCCTTCTCACCTT AAATATTATCACCGTGACCTTGCAATAACATATACCAACAACGCTAATTCATCTTCAGGTACTCCTCACCCTTTATCTCATGCTCTTTCTTACAAGAATT GTTCTACTCCTTTCAAAAATTTCTGCCTATCTATCACCACTCAACCAGAACCAAATTCCTATTCCCAAGCATCTAAAATTCCATGTTGGCAGGAAGCAAT GAATAAAGAATTACAAGCTCTATCCTTCAATGATACTTGGTCTCTTGTACCTCTACTCAAAGCCGTCTTGTAAGACACAAAGCCCGTCTTGTAAGACACA AAGCCCGTCTTGTAGCTAAGGGATACACTCAAATGGAAGGTATTGACTACTTTGATACTTTCTCTCATGTGGTCAAAATCACCACTGTTCTTGCCCTTGA TGCTGCCAAGTCTTGGTACTTGGAACAAATGGACATCAAAAACATTTTTTTGCATGGAGATTTACATGAAGAGGTCTACATGGTTCCACCACGTGGGTTA TCTCTACCTCAACCCAACCTATTTTGCAAACTTCACAAATCACTCTATGGCCTTAAACAGGCCAGCCGAGAATGGCACACCACATTGTCAAACAAACTTA TCTCCTTAGGGGTCTCTCATTCAGAAGCAGACCAAGCCTTGTTCACTAAAGGCCCTCCTACTTCATTCACGGTTATCCTTGTGTATGTCGATGATCTCAT TTTGGCAGGAAATGATTACCATCAGATTCAACAAGTTAAACATGTACTCCATCAAGCCTTTCAGATCAAGGATTTGGGAAAACTTCGTTATTTCTTGAGC CTGGAAATAACACACACCAAGGAAGGCATACACATGAATTAGAGAAAGTATACATTATCATTACTAGAAGATTCTGGTTGCCTTGCTTCCAAGCCAACCA AAACCCCTTTTGACCCCTCCACCAAGTTACAAGTTGATCAAGGCAATCCTTTTCCTGATCCATCTGGTTATAGACGCCTCATTGAGCGCCTCATCTACCT CACTATTTCCAGACTATGTGTGTCATATGCAATGCAACAATTGAGTCTATTTATGGCTACACCATTGGACTCACATTACAAAGCAACCACCTGTGTGCTT CGTTACTTGAAATCTTCTCCTGCTCAATGTCTCTTCTTCCCTACTTCATCTACTTTAAAACTCACTGGTTTTGCCGATTCTGATTGGGCCTGCTGTCTCG ACACACGAAAATCAATCATAGATTTTTGTATTTTCCTTGGTAACTCCCTTATCTCTTCGAAAACAAAGAAGCAAAACATTGTTAGTCGTTCTTCCTCAGA GACTGAATACAGAGCCCTTGGCACCTTAGTTTGTGAGATTCAATGGCTTGAATACTTGTTCAATGACTTACATATTCCCTTTACCATTCCCACTTCTGTT TATTGTGATAATCGCTCTGCAATCTATCTAGCTCATAATCCAGTTTTTCATGAGCGCACTAAACATATAGAGATAGATTGTCATTTGGTTCGTGAGAAAA TCAAGAAGGATCTCATTCATTTGCTTCCTATTTCTTCTTCTAAAAAACTGGCAGATGTCTTCACAAAGCCCTTGCATTCTACTTCCTTCCACAACTTTAT TTCCAAGTTAGGACTCATGGATATCCATGGTCCAACTTGAGGGGATGTTAATCTTCTTCATCTTTCATGCTTCTTCTTTTGCCTTTGTATTGGCCTTGTA CATTCTGGCCGTGTTCTCTTTTAGCTAGCTTCTATAGTTTCTTTTCCTATTGGGCCTTGTTATATAGTTAGTCCACATTCCTTTTCTAGTCAGATAGTCT ATTATTCTGTTTTTCTATGTTTCCTCTTTTAGTAAATCTTGTATATAAGGAACAATAGGTTCTCTGCATC BLAST
Tissueflowers
Gene nameLI_gene_63283; 
Additional informationdetails; 

Expression of Ll_transcript_10541

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_10541
BlastpRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 38.32% of identity
BlastxRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 34.51% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019442281.1)
PfamReverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;