Id Trinity | FTRINITY_DN56807_c1_g1_i2 |
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Name Transcript | Ll_transcript_8957 |
Sequence | TGTAAATAAATAAATAGTGTAAAAATATTATTACTTTCTTAATCTTAAACTTTCATGTTGCGTTTTGGTACCTTTGCCACTAGCATCAGTTTCTCTTGAA TTGTGATTATCTCTTTCACTGTGGAGCGTGTCACCCAGAAAAGTGAACTCTTTTTTAGGGGGATGCTGCAGATTTGTGTATTTTATTATAGAAATAGAAG ATCACAGGGACAATGATATCGGGTGGAGGTGGAAGATCGTCTTCGACTTCTTCAACATCATCATGGGCACCCACGACTTGGGTGTCAGCATCAGGGAAGA GGATTCAAAGGGAAATGATGGAGCTCAACAATGACCCTCCTCGTGATTGCTCTGCTGGCCCCAAGGGTGATAATCTCTATCATTGGATTGCTACCATTAT CGGCACCCCAGGAACGCCATACCAAGGTGGCATATTTTTTCTTGACATAATATTTCCAACTGATTATCCCTTCAAGCCTCCACAGGTATTCTCAACTACT TTTTACATATTAGCATTGTTTTTGTAGTGTTTTTTGATATAATTGTTTATTACAAAAGAGTGAACATACAGTTTTATGAAGTGATCTATTTCAGCTTTAC ATTTCATAAAAATCTCTGCTTTTGGACTTCTATATATCCCATTATATTTGATTATTTCAATAATTATATGTCCAAAGTCTAGTGTTTTAAATTGCGATTG CGGTCGCGGTTACTACGATTGCAGCCGTTACGATGCGGATTGTGGCCGTTGCGGTGTGAATTATTTTGTGAATAAAAAAATAGTTTTGATATT BLAST |
Tissue | flowers |
Gene name | LI_gene_63306; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_8957
Blastp | Constitutive photomorphogenesis protein 10 from Arabidopsis with 67.59% of identity |
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Blastx | Constitutive photomorphogenesis protein 10 from Arabidopsis with 83.33% of identity |
Eggnog | ubiquitin-conjugating enzyme(COG5078) |
Kegg | Link to kegg annotations (AT3G13550) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431743.1) |
Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |