Id Trinity | FTRINITY_DN56812_c5_g12_i2 |
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Name Transcript | Ll_transcript_10848 |
Sequence | AAGGAAACAAGGGAATGATGAAAAGTGATAACAAAAGAAAAGGTGGAAAAGAATTCCAAGAAAATTAAAAGTAGATGGATATGAGACAAAGGTAGAATAC TAATGCAAGAGAAAGAGACATAGAGAGAGAAATTTGAGGAGGTTCAAATAATAAAGGGGACCATAGAGGGGTATGAAGGATATAGAAGGTGAAGTAGTAT AAGTTATTCATTGATGAATTCTTTCTCTCTCTTTCTTTCATGTCCACCAACAAAACCCACTGAAGCAAATTATCATGATGAAACTCACTCTACACATTGC ACTCCTAAAAAGTTATTTCCTTCCTCATCAAAACCTTCATTCCCTTAAATTTACCTCTTCAACTTCGCCTTCTTCTCATCCATAACCCCCCACTACCCTA AAACCATGAAACTTTTTTTGTTCTTTCTCACATTCTCCTTCTTTTCCCAAACATTCCTTGTTTCCTCTGCTGCAACCTTGCCCCTTCAACTCATATCACT GCTTTCCATAAAATCTTCCCTCATAGACCCTTTCAAGTCCCTCCATGATTGGGACCCTTCCCCTCCTACATTATTCAAGTCTAACCCAATATGGTGTTCA TGGACAGGTATAACATGTCACCCAAAAACATCTCAAATTATCACCCTTGACCTATCTCAGCATAATCTTTCAGGGACAATCTCACCTGAGATTAGGTACC TATCCAACTTGAACCACTTGAATCTTAGTGGAAATGATTTTAGTGGAACTTTTCAAGCAGCAATTTTTGAACTTTCAGAGCTTAGGACTCTAGATATCAG TCACAATTCCTTCAATTCAACTTTCCCACCTGGAATATCGAAGCTCAAGTTCTTGAGGGTCTTCAATGCTTACAGCAACAACTTCACTGGCCCTCTGCCT CAAGAGTTAATCAGGCTTCGGTTTCTCGAGCAGCTCAACCTTGGCGGAAGCTACTTCAATGACAAAATTCCACAAGTGTATGGCAGTTTCTCAAGACTCA AGTTCTTGAATTTGGCAGGCAATGCATTGGAAGGTCCACTACCTCCTCAACTAGGCTTCTTATCACACCTAGAACACTTGGAAATCGGATACCAATCATT TTCGGGATCATTACCACCAGAACTGGCATTACTATCCAATCTAAAATATTTAGATATCTCAGTTTCTAACATTTCAGGGTTGATTCCACACAACATTGGC AACTTAACCATGTTGGAGACTTTATATCTCTTCCAGAATGGCTTAACTGGGGAAATTCCATCAAGCATAGGCAACTTGAAATCTCTCAAAGCTCTCGACC TTTCGGATAACCAACTCAATGGTTCAATTCCAACACGAGTTTCAATGCTAAAGGAACTAACCATTTTGAATTTAATGCTAAACAAGCTAACAGGGGAGAT ACCGGAAGGGATTGGAGAGCTTCCATATCTTCACATTCTCAAAGCCTTCAACAACTCGCTCATCGGAACTCTTCCACGACAACTTGGTTCAAATGGGTTG CTTCAATGGTTAGATGTCTCCACCAATTCACTCCATGGTCCAATTCCACCAGATGTTTGCAAAGGCAACAACCTAATCAAACTCATCCTCTTTGGCAACA ACTTCCAAGGTTCTCTCCCAATTTCAGTCTCCAGTTGCACCTCCTTGACTCGAGTTCGCATCCAAAACAACCACCTAAACGGTTCAATCCCTCCCGAATT TGCAATTCTCTCAAACCTAACCTACCTTGACATGAGCAACAACAACTTCAAAGGTGAAATTCCAGTAGATTTCGGCAATGCTGCTAAACTAGAGTACCTG AACATCTCAGGTAACTCTTTCGAATCAGCATTGCCGAATAACATCTGGAATTCCACCAATCTTCAGATTTTCTCGGCCGCTGATTCCAAAATCAGCGGCG AAATACCTGATTTCATAGGGTGCAGAAACATATACAGGATTGAATTACAAGGAAACTCACTCAACGGAACAATTCCATGGGACATTGGTCACTGCGAGAA GCTTATTCAGTTGAATTTGAGCAAAAACTCTCTCACCGGAATCATACCTTGGGAAATTTCTACACTACCTTCCATCACCGTCGTCGATCTCTCTCACAAT TCACTCACCGGAACGATTCCTTCCAACTTCAACAACTGTTCCACTCTCGAGAATTTCGACGTCAGCTTCAACTCTCTCACCGGACCAATCCCTAGCTCCG GCGTCTTCTCCAACCTCCACCCTTCCTCCTACTCCGGAAACCGCGGCCTCTGCGGCGGCGTTTTGGCAAAGCCCTGCGCGGCGGACGCACTCGCCGTAGG AAACAACGAGGTCGACGTTCGGAATCAGCAGCCGAAGAGAACCGCCGGCGCAATCGTTTGGATTGTGGCGGCGGCGTTTGGGATCGGACTCTTCGTTCTG GTGGCCGGGGCCCGCTGTTTCCACGCGAATTATAATCGTCGCTTCAACGACCAAAACACCCACGACATCGGCCCGTGGAAATTAACCGCATTCCAGCGGT TAAATTTCACGGCCGATGACGTGGCAGAGTGCTTATCAGTCTCTAATAAGGTCTTAGGAATGGGGTCCACAGGCACGGTTTATCGAGTGGAAATGCCAGG TGGCGAAATCGTAGCCGTTAAAAAGCTTTGGGGAAAGCAAAAAGAGCATTTAATAAGATGGAGAAGAGGGGTTTTGGCTGAGGTGGAAGTGTTGGGAAAT GTGAGGCATAGAAATATAGTAAGGTTGTTAGGTTGTTGTAGCAATAGGGAATGTACCATGTTGTTGTATGAGTACATGCCTAATGGGAATTTAGATGATT TGTTACATGGCAAGAATAAGATTGATAATCTAATTTCGGACTGGTTCACTCGATATAAGATCGCGTTGGGTGTGGCTCAGGGGATTTGCTATCTTCATCA TGATTGTGAACCTGTTATCGTTCATCGTGATCTCAAACCGAGTAATATATTATTGGATAGTGATATGGAAGCTAGAGTGGCCGATTTCGGTGTGGCTAAA TTGATTCAAACTAATGAGTCGATGTCTGTCATTGCTGGATCCTATGGTTATATTGCTCCAGAATATGCTTACACCCTACAAGTGGATGAAAAGAGTGATA TCTACAGCTATGGAGTGGTGTTGATGGAGATTCTAACCGGAAAACGATCCGTGGACTCGGAATTCGGCGACGGAAATAGCATTGTGGATTGGATTAGATG TAAAATAAAGAGTAAAGATGGGATTGATGATATATTAGATAAGAATGTAGGAGCAGGGTGCAAGTCAGTGAGGGAAGAAATGATACAAATGCTTAGGATT GCTTTGCTTTGTACAAGTAGAAACCCAGCAGATAGGCCTTCAATGAGAGATGTAATGTTGATGCTACAAGAGGCCAAGCCAAAGAGAAAATTGCTTCATA ATGGTGTAGCTGAAAATGTGGTTGATAATGGTGAAATTCCTTTGCCACAAAAGCCAATGATAGAAAGCTAATATGTTTATATATGATGATTGAAATGGGT TTTTCACTTTTTTTTGTTTTGGGTGTTTTTTTTTCTTATTATGGGGGGATTGGTATAGGAGAAAGTGGTTTTCTATTTTTAATTTGAATGGAATTTCAAG TGTTAGTTGTTCTATTTTTTTTGGTGTTATATGATGTTATGACTCTTGTTTGTTAATGTTATATATTAAAGGTGTGTGACTTATATAGTTGGTTTAGATC ATTAACCAAGAAAATGTGTGAAAAAATAAGCATGGCATGGTTGAGAATAGTAATATATGCATATAATGCTTAATATATATTTTTTAAGTTTTTTGAATAA BLAST |
Tissue | flowers |
Gene name | LI_gene_63355; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_10848
Blastp | Leucine-rich repeat receptor-like protein kinase TDR from Arabidopsis with 64.04% of identity |
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Blastx | Leucine-rich repeat receptor-like protein kinase TDR from Arabidopsis with 64.04% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT5G61480) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452171.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |