Id Trinity | FTRINITY_DN56813_c5_g1_i10 |
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Name Transcript | Ll_transcript_9285 |
Sequence | CGTGAAGAAAACCGTCGTATCCGGTTTTAAAAGGAACGCTTAGGTTTAGGTTCGATGTAATAAATGAAATCAATATTTAATGTTGTACAGTTGAATTCTA CCATTTCTTAATCATCTCTTCTCTCTTACACACTTTTTTCTTTCACTCCATCGCTGCCATGTCTTACAGGTTTAAGGTTTTGATGTGTGCCAAGGAGGGT TACCATGCTATTTGAATGGCAAGGCTTGAAATGAATGATTAAAGCTTATTGGGGTCAATGTAGTGCTTGGAATTTTTAAAATTAAGGGTGAATATGTAAG GTTTCTGTTTGGCCTCAGATGCCAGAATGGTGTGAAGAAGTGAAGAAACGAGACAGGCTCTATAAGTACACCTCCTGGCCGCTATTGGGACGTGATACAT GTTCGTGTAATCATACATGGCCTGGCCACTTGTCGATCGACTTTTGTGTAGTTTTTCATACTTTTCTGGCCTGCCCAATACATGTACTCCTTTTTTTCTG AATCAAAAGACATGAATAATCTTGTCTAGAGCTTGTTCTTAGTGCATAGTGTGAGAGTGACTCTCATGGGTTCCTATCAAACCAGTGACTTGTCAAGGCA CCTTTCCTTGTGTTGTTCAAACCAAAACTTATCGAGAAATCATTTTCTTGTATTCAAAAGGCTTATCACTCCCACTGAGTGTGAAGCTTCTTATCACCGT CTTTTGTCTAATTTGTTTTCCCTTATTTTATCATTTTTGTTTTCCTTCATAGCCATAGAATTAAGTCATCACAAAACCCATTAGTTGTTATTTTTCTTAA TGAATTTCGACCTCCATTGGAACATAAACAAGTGATATTTAGTTTTTCTTATTATTCCTAATCCTAGCACCTCCCTAATCAAGAACGGTCTGAAGTATTT ACCTATGCAAGGTGGGGTCTAATCAGGTTTTTACATAATGCTCGTAAATGGTTTGCAAGTTCTATGCCCGTGGAACATGTTTGAAAGGGGAGCAATGTGA TTTTGTCCATGAGAGAAAGGATTCACCATCTGATATTTGCTCATTCTTTCAGAAAGGATCCTGTGCTTATGGTAGTCGATGCAGATATAAGCATCTCAAA GCTTCCCAAGCATCATCTTCTGTGTCATCTTCAGAAAATGGACACCAACCTTTGGCTTCAGATTCTTCTGTCACTCGCGCTGCTAAAGGAACATCAAGTT GGATTCCAAAGACTACGAAATTGTCTTCACCCGACAAGCGTGCAAGGAATTCACAACACAAGCACCAGATCTCCACGGGGAATGATGATGTTGGTGAATC CAGTACTCGAGGTGCTATACTATCAAATCATTTATTTTGTCAATTTGCTGCTGCTGCCTGCCCCCTAGGAGATAAATGTCTCCGTGTACATGGAAATCAA TGCTTATACTGTAGAAAACATTGCTTGCATCCCACTGATCGAAAGGAAAAAGAAAATCATTTGAGGACTTGTGAGAAAAAGGCAAAATACCTTCAGGCTT TGAAATTTAGTCAAGAAATAGAATGCAATGTGTGTCTCGACCGTGTTCTTTCCAAACCTACACTAGCTGAATGTAAGTTTGGGGTGCTTCCTGAATGCAA CCATGCTTTCTGTTTGTCATGTATCCGCAATTGGCGTAATAGTGCTCCAATCTCTGGATTTGAGCAGAGTAATAATGCTAATACAGTGAGAACCTGCCCT GTTTGCCGCAAACTGTCATATTTTGTCATTCCAAGTGATATTTGGTATTCTACAAATGAAGAAAAACAGGAAATTATTGACAACTACAAGGCAAACTGCA GGTTGATTGATTGCAAACATTTCAACTCCGGAAATGGGAACTGCCCATTCGGGAATAGTTGTTTCTACAAGCATACTGTGAAGCCTGGCTCATACACATG GATACATAACAGACCACCATCTCAGCGCAGACCAAACAGCTATGATATGCATGACATGTTGGATATGCTCAGCGAAGTTGATTTATCAAGTGGGGAGCTT TACTCCATCATGAGAGACTCGGAGTTTTTCGATGATATGGATCCATTCCAGATGATGGCTATATCAGATGCAATGGGTAGCGGGGATGGTCCTTGTCTGG GTCCTTTTGATTCTGACGATGAAGAAGTAGACATGGATTTTTTCCGGATGGCTAATTTGTCAGAGGCATTGGCTTCTGGTATCGACGACTTTGGCCCGGA AGATTTTGACAATGATGAAATAGATCCTATGGAGGCAGCATTACTGTCAATGATGATGCATTCTAATATTGAAGAAGAGGATGAAGAAGAAGACAGTGAT GAAGACTACTAGATTTACTTGGTTCACATGAAAACCATCTTTAGCCAAGTTTTTGAAGTAGTTGGTATTTGGATTATTTGCCATTTTGTATATTTACTCC TATCATACTATTGAAGGAGTTTTGGCTTGATGATTTTTGTGTAAGTCCATTTTGCTGGTTGAATTTTGAGTACCCTTTTGAAAGGGTTGTTATTGTGGTT TGAACATGATAGAACAGTTCTATATCAGCATATCCCGTATCCTATAAAATTGTGTTGGTTCTGGTTGCTATAATGCCATAAACCCTATGGATGTTGGTTT TGGTCTGTGCCGGTATACATCTACTGTCTCACAAGTTATGTTACTACATTTGTTAACAGTTGTGATTGGTCGGGAGAATAGTTAAGCATTCATTTTTAAT TTGAATATATTTTTCAACCAATTACAAGTTGATGGTACATGCAGTGACACAACTTATATAGTGGCGGATGAGTTTCTATCTAGGGTCAGTTTAGAATGAT TTTCCACATTTCATGGATTGGGATTGGGAATTCAAGTTTCATATACAATTTTCATTTAACCTCATATTGTCATCTTAAGATTCCT BLAST |
Tissue | flowers |
Gene name | LI_gene_63377; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9285
Blastp | E3 ubiquitin-protein ligase makorin from Arabidopsis with 49.68% of identity |
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Blastx | E3 ubiquitin-protein ligase makorin from Arabidopsis with 49.68% of identity |
Eggnog | Ring finger protein(ENOG410XRM0) |
Kegg | Link to kegg annotations (AT3G08505) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425357.1) |
Pfam | Zinc-finger containing family (PF15663.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |