| Id Trinity | FTRINITY_DN56813_c5_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_9289 |
| Sequence | CGTGAAGAAAACCGTCGTATCCGGTTTTAAAAGGAACGCTTAGGTTTAGGTTCGATGTAATAAATGAAATCAATATTTAATGTTGTACAGTTGAATTCTA CCATTTCTTAATCATCTCTTCTCTCTTACACACTTTTTTCTTTCACTCCATCGCTGCCATGTCTTACAGGTTTAAGGTTTTGATGTGTGCCAAGGAGGGT TACCATGCTATTTGAATGGCAAGGCTTGAAATGAATGATTAAAGCTTATTGGGGTCAATGTAGTGCTTGGAATTTTTAAAATTAAGGGTGAATATGTAAG GTTTCTGTTTGGCCTCAGATGCCAGAATGGTGTGAAGAAGTGAAGAAACGAGACAGGCTCTATAAGTACACCTCCTGGCCGCTATTGGGACGTGATACAT GTTCGTGTAATCATACATGGCCTGGCCACTTGTCGATCGACTTTTGTGTAGTTTTTCATACTTTTCTGGCCTGCCCAATACATGTACTCCTTTTTTTCTG AATCAAAAGACATGAATAATCTTGTCTAGAGCTTGTTCTTAGTGCATAGTGTGAGAGTGACTCTCATGGGTTCCTATCAAACCAGTGACTTGTCAAGGCA CCTTTCCTTGTGTTGTTCAAACCAAAACTTATCGAGAAATCATTTTCTTGTATTCAAAAGGCTTATCACTCCCACTGAGTGTGAAGCTTCTTATCACCGT CTTTTGTCTAATTTGTTTTCCCTTATTTTATCATTTTTGTTTTCCTTCATAGCCATAGAATTAAGTCATCACAAAACCCATTAGTTGTTATTTTTCTTAA TGAATTTCGACCTCCATTGGAACATAAACAAGTGATATTTAGTTTTTCTTATTATTCCTAATCCTAGCACCTCCCTAATCAAGAACGGTCTGAAGTATTT ACCTATGCAAGGTGGGGTCTAATCAGGTTTTTACATAATGCTCGTAAATGTGAGGGTTTTAATTTGTATGATATCTTCTCCTTGCCTTTTATTACTTTCT CCGTTGTATTTTCAGAATCTTCATTGATATCTGCTTCTTGCTAATTGTTTATTTATTTATTTTATTGAATCTATGAATTGTTGTAGGGTTTGCAAGTTCT ATGCCCGTGGAACATGTTTGAAAGGGGAGCAATGTGATTTTGTCCATGAGAGAAAGGATTCACCATCTGATATTTGCTCATTCTTTCAGAAAGGATCCTG TGCTTATGGTAGTCGATGCAGATATAAGCATCTCAAAGCTTCCCAAGCATCATCTTCTGTGTCATCTTCAGAAAATGGACACCAACCTTTGGCTTCAGAT TCTTCTGTCACTCGCGCTGCTAAAGGAACATCAAGTTGGATTCCAAAGACTACGAAATTGTCTTCACCCGACAAGCGTGCAAGGAATTCACAACACAAGC ACCAGATCTCCACGGGGAATGATGATGTTGGTGAATCCAGTACTCGAGGTGCTATACTATCAAATCATTTATTTTGTCAATTTGCTGCTGCTGCCTGCCC CCTAGGAGATAAATGTCTCCGTGTACATGGAAATCAATGCTTATACTGTAGAAAACATTGCTTGCATCCCACTGATCGAAAGGAAAAAGAAAATCATTTG AGGACTTGTGAGAAAAAGGCAAAATACCTTCAGGCTTTGAAATTTAGTCAAGAAATAGAATGCAATGTGTGTCTCGACCGTGTTCTTTCCAAACCTACAC TAGCTGAATGTAAGTTTGGGGTGCTTCCTGAATGCAACCATGCTTTCTGTTTGTCATGTATCCGCAATTGGCGTAATAGTGCTCCAATCTCTGGATTTGA GCAGAGTAATAATGCTAATACAGTGAGAACCTGCCCTGTTTGCCGCAAACTGTCATATTTTGTCATTCCAAGTGATATTTGGTATTCTACAAATGAAGAA AAACAGGAAATTATTGACAACTACAAGGCAAACTGCAGGTTGATTGATTGCAAACATTTCAACTCCGGAAATGGGAACTGCCCATTCGGGAATAGTTGTT TCTACAAGCATACTGTGAAGCCTGGCTCATACACATGGATACATAACAGACCACCATCTCAGCGCAGACCAAACAGCTATGATATGCATGACATGTTGGA TATGCTCAGCGAAGTTGATTTATCAAGTGGGGAGCTTTACTCCATCATGAGAGACTCGGAGTTTTTCGATGATATGGATCCATTCCAGATGATGGCTATA TCAGATGCAATGGGTAGCGGGGATGGTCCTTGTCTGGGTCCTTTTGATTCTGACGATGAAGAAGTAGACATGGATTTTTTCCGGATGGCTAATTTGTCAG AGGCATTGGCTTCTGGTATCGACGACTTTGGCCCGGAAGATTTTGACAATGATGAAATAGATCCTATGGAGGCAGCATTACTGTCAATGATGATGCATTC TAATATTGAAGAAGAGGATGAAGAAGAAGACAGTGATGAAGACTACTAGATTTACTTGGTTCACATGAAAACCATCTTTAGCCAAGTTTTTGAAGTAGTT GGTATTTGGATTATTTGCCATTTTGTATATTTACTCCTATCATACTATTGAAGGAGTTTTGGCTTGATGATTTTTGTGTAAGTCCATTTTGCTGGTTGAA TTTTGAGTACCCTTTTGAAAGGGTTGTTATTGTGGTTTGAACATGATAGAACAGTTCTATATCAGCATATCCCGTATCCTATAAAATTGTGTTGGTTCTG GTTGCTATAATGCCATAAACCCTATGGATGTTGGTTTTGGTCTGTGCCGGTATACATCTACTGTCTCACAAGTTATGTTACTACATTTGTTAACAGTTGT GATTGGTCGGGAGAATAGTTAAGCATTCATTTTTAATTTGAATATATTTTTCAACCAATTACAAGTTGATGGTACATGCAGTGACACAACTTATATAGTG GCGGATGAGTTTCTATCTAGGGTCAGTTTAGAATGATTTTCCACATTTCATGGATTGGGATTGGGAATTCAAGTTTCATATACAATTTTCATTTAACCTC ATATTGTCATCTTAAGATTCCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63377; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9289
| Blastp | E3 ubiquitin-protein ligase makorin from Arabidopsis with 49.84% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase makorin from Arabidopsis with 49.84% of identity |
| Eggnog | Ring finger protein(ENOG410XRM0) |
| Kegg | Link to kegg annotations (AT3G08505) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425357.1) |
| Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |