| Id Trinity | FTRINITY_DN56813_c5_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_9278 |
| Sequence | CGTGAAGAAAACCGTCGTATCCGGTTTTAAAAGGAACGCTTAGGTTTAGGTTCGATGTAATAAATGAAATCAATATTTAATGTTGTACAGTTGAATTCTA CCATTTCTTAATCATCTCTTCTCTCTTACACACTTTTTTCTTTCACTCCATCGCTGCCATGTCTTACAGGTTTAAGGTTTTGATGTGTGCCAAGGAGGGT TACCATGCTATTTGAATGGCAAGGCTTGAAATGAATGATTAAAGCTTATTGGGGTCAATGTAGTGCTTGGAATTTTTAAAATTAAGGGTGAATATGTAAG GTTTCTGTTTGGCCTCAGATGCCAGAATGGTGTGAAGAAGTGAAGAAACGAGACAGGCTCTATAAGTACACCTCCTGGCCGCTATTGGGACGTGATACAT GTTCGTGTAATCATACATGGCCTGGCCACTTGTCGATCGACTTTTGTGTAGTTTTTCATACTTTTCTGGCCTGCCCAATACATGTACTCCTTTTTTTCTG AATCAAAAGACATGAATAATCTTGTCTAGAGCTTGTTCTTAGTGCATAGTGTGAGAGTGACTCTCATGGGTTCCTATCAAACCAGTGACTTGTCAAGGCA CCTTTCCTTGTGTTGTTCAAACCAAAACTTATCGAGAAATCATTTTCTTGTATTCAAAAGGCTTATCACTCCCACTGAGTGTGAAGCTTCTTATCACCGT CTTTTGTCTAATTTGTTTTCCCTTATTTTATCATTTTTGTTTTCCTTCATAGCCATAGAATTAAGTCATCACAAAACCCATTAGTTGTTATTTTTCTTAA TGAATTTCGACCTCCATTGGAACATAAACAAGTGATATTTAGTTTTTCTTATTATTCCTAATCCTAGCACCTCCCTAATCAAGAACGGTCTGAAGTATTT ACCTATGCAAGGTGGGGTCTAATCAGGTTTTTACATAATGCTCGTAAATGGTTTGCAAGTTCTATGCCCGTGGAACATGTTTGAAAGGGGAGCAATGTGA TTTTGTCCATGAGAGAAAGGATTCACCATCTGATATTTGCTCATTCTTTCAGAAAGGATCCTGTGCTTATGGTAGTCGATGCAGATATAAGCATCTCAAA GCTTCCCAAGCATCATCTTCTGTGTCATCTTCAGAAAATGGACACCAACCTTTGGCTTCAGATTCTTCTGTCACTCGCGCTGCTAAAGGAACATCAAGTT GGATTCCAAAGACTACGAAATTGTCTTCACCCGACAAGCGTGCAAGGAATTCACAACACAAGCACCAGATCTCCACGGGGAATGATGATGTTGGTGAATC CAGTACTCGAGGTGCTATACTATCAAATCATTTATTTTGTCAATTTGCTGCTGCTGCCTGCCCCCTAGGAGATAAATGTCTCCGTGTACATGGAAATCAA TGCTTATACTGTAGAAAACATTGCTTGCATCCCACTGATCGAAAGGAAAAAGAAAATCATTTGAGGACTTGTGAGAAAAAGGCAAAATACCTTCAGGCTT TGAAATTTAGTCAAGAAATAGAATGCAATGTGTGTCTCGACCGTGTTCTTTCCAAACCTACACTAGCTGAATGTAAGTTTGGGGTGCTTCCTGAATGCAA CCATGCTTTCTGTTTGTCATGTATCCGCAATTGGCGTAATAGTGCTCCAATCTCTGGATTTGAGCAGAGTAATAATGCTAATACAGTGAGAACCTGCCCT GTTTGCCGCAAACTGTCATATTTTGTCATTCCAAGTGATATTTGGTATTCTACAAATGAAGAAAAACAGGAAATTATTGACAACTACAAGGCAAACTGCA GGTCATTTCTTATCTACTACTACTTATACTACTATTTATATTCCCTCAAACTTGACCTTGAACTGATTTGTTACTTGGCAATTCCAGTTACGGTTAATTG ATGAGAGTGTTTTAGTGGTGATTGTATGGGAAAACATTCCCTGTATCTCATCCCTGCATATGCCCACTACTCCCGTGCTTATTACACCCTATATTGCACT TCTCCCCTTCCCTACCACACACCATACACCAATAATATACGAAAATACATGAGCACAACTATCCGTACATGTGTTTGTGTGGTATGTTGATGCATTCACT CTTCACATTGTTGTCTAGGTGCATTTTTTTATTGAGTTCGGTACTTCGGTTTAACCAGGTGGCCATCTGACAATTGAAGAGATCTGACTTAATTTTAATA GTAAGAATTTAGATGTTTGATATTCCAGTTTTGCTTACTGTCTTTTATCCAGGTTGATTGATTGCAAGCATTTCAAATCTGGTAATGGGAACTGTCCATT TGGGAATATTTGTTTCTACAAGCATACTGTGAAGCCTGGCTCATACACATGGATACATAACAGGCCACCACCTCAACGTAGACCTAACAATTATGATATG TATGACATGTTGGATATGCTCAGCGAAGTTAATTTATCAAGTGAGGAGCTTTATTCCATCATGAGGGGCTCTGGGCTTTATAATGATATGGATCCATTTG AGATGATGGCTATATCAGATGCAATGGCCAGTGGGGATGGTCCTTGTTTGGGTCCTTTTGATTCTGATGATGATGAAGTAAACATGGATTTTTCCAGGAT GACTTCTTTGTCAGAGGCATTAGCTTCTGGTGTGGACGACATTGGCCCTGAAGATTTTGGAAATGATGAAATGGCTCATATGGAGGCAGCATTGTTATCA ATGATGATGCATTCTAATATTGAAGAAGAGGAGGAAGAAGAATACAGTGATGAATACTATTAAATTTACTTAGTTCTTATGAAACCCATCTTGAGTCATT TTCTGAGGTAGGTTCCTTTGGGATTTGGATTCAATGACTTTCAGAAATATTGGGCAGTTGAGATTCTTATTCTAGTTTGTGGTATGTTAATTCTCATGTC AATAGTTGGTATTGTGATTATTTGCCATTTTTGTATATTTAATCATATCATACTATTGAAGGAGTTTTGGTTTGGGGTTTGTTTAGTCCACATATTGGTC CTTGAATTTTGATTGCCCTATTGAAAGGGTTACTATTTTGGCTTGAAGATGATAAAACAGTGCTGTGTCTTTCATATATAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63377; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9278
| Blastp | Putative RING-type E3 ubiquitin transferase C3H69 from Arabidopsis with 48.51% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase makorin from Arabidopsis with 47.06% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425357.1) |
| Pfam | Zinc-finger containing family (PF15663.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |