| Id Trinity | FTRINITY_DN56813_c5_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_9279 |
| Sequence | CGTGAAGAAAACCGTCGTATCCGGTTTTAAAAGGAACGCTTAGGTTTAGGTTCGATGTAATAAATGAAATCAATATTTAATGTTGTACAGTTGAATTCTA CCATTTCTTAATCATCTCTTCTCTCTTACACACTTTTTTCTTTCACTCCATCGCTGCCATGTCTTACAGGTTTAAGGTTTTGATGTGTGCCAAGGAGGGT TACCATGCTATTTGAATGGCAAGGCTTGAAATGAATGATTAAAGCTTATTGGGGTCAATGTAGTGCTTGGAATTTTTAAAATTAAGGGTGAATATGTAAG GTTTCTGTTTGGCCTCAGATGCCAGAATGGTGTGAAGAAGTGAAGAAACGAGACAGGCTCTATAAGTACACCTCCTGGCCGCTATTGGGACGTGATACAT GTTCGTGTAATCATACATGGCCTGGCCACTTGTCGATCGACTTTTGTGTAGTTTTTCATACTTTTCTGGCCTGCCCAATACATGTACTCCTTTTTTTCTG AATCAAAAGACATGAATAATCTTGTCTAGAGCTTGTTCTTAGTGCATAGTGTGAGAGTGACTCTCATGGGTTCCTATCAAACCAGTGACTTGTCAAGGCA CCTTTCCTTGTGTTGTTCAAACCAAAACTTATCGAGAAATCATTTTCTTGTATTCAAAAGGCTTATCACTCCCACTGAGTGTGAAGCTTCTTATCACCGT CTTTTGTCTAATTTGTTTTCCCTTATTTTATCATTTTTGTTTTCCTTCATAGCCATAGAATTAAGTCATCACAAAACCCATTAGTTGTTATTTTTCTTAA TGAATTTCGACCTCCATTGGAACATAAACAAGTGATATTTAGTTTTTCTTATTATTCCTAATCCTAGCACCTCCCTAATCAAGAACGGTCTGAAGTATTT ACCTATGCAAGGTGGGGTCTAATCAGGTTTTTACATAATGCTCGTAAATGTGAGGGTTTTAATTTGTATGATATCTTCTCCTTGCCTTTTATTACTTTCT CCGTTGTATTTTCAGAATCTTCATTGATATCTGCTTCTTGCTAATTGTTTATTTATTTATTTTATTGAATCTATGAATTGTTGTAGGGTTTGCAAGTTCT ATGCCCGTGGAACATGTTTGAAAGGGGAGCAATGTGATTTTGTCCATGAGAGAAAGGATTCACCATCTGATATTTGCTCATTCTTTCAGAAAGGATCCTG TGCTTATGGTAGTCGATGCAGATATAAGCATCTCAAAGCTTCCCAAGCATCATCTTCTGTGTCATCTTCAGAAAATGGACACCAACCTTTGGCTTCAGAT TCTTCTGTCACTCGCGCTGCTAAAGGAACATCAAGTTGGATTCCAAAGACTACGAAATTGTCTTCACCCGACAAGCGTGCAAGGAATTCACAACACAAGC ACCAGATCTCCACGGGGAATGATGATGTTGGTGAATCCAGTACTCGAGGTGCTATACTATCAAATCATTTATTTTGTCAATTTGCTGCTGCTGCCTGCCC CCTAGGAGATAAATGTCTCCGTGTACATGGAAATCAATGCTTATACTGTAGAAAACATTGCTTGCATCCCACTGATCGAAAGGAAAAAGAAAATCATTTG AGGACTTGTGAGAAAAAGGCAAAATACCTTCAGGCTTTGAAATTTAGTCAAGAAATAGAATGCAATGTGTGTCTCGACCGTGTTCTTTCCAAACCTACAC TAGCTGAATGTAAGTTTGGGGTGCTTCCTGAATGCAACCATGCTTTCTGTTTGTCATGTATCCGCAATTGGCGTAATAGTGCTCCAATCTCTGGATTTGA GCAGAGTAATAATGCTAATACAGTGAGAACCTGCCCTGTTTGCCGCAAACTGTCATATTTTGTCATTCCAAGTGATATTTGGTATTCTACAAATGAAGAA AAACAGGAAATTATTGACAACTACAAGGCAAACTGCAGGTCATTTCTTATCTACTACTACTTATACTACTATTTATATTCCCTCAAACTTGACCTTGAAC TGATTTGTTACTTGGCAATTCCAGTTACGGTTAATTGATGAGAGTGTTTTAGTGGTGATTGTATGGGAAAACATTCCCTGTATCTCATCCCTGCATATGC CCACTACTCCCGTGCTTATTACACCCTATATTGCACTTCTCCCCTTCCCTACCACACACCATACACCAATAATATACGAAAATACATGAGCACAACTATC CGTACATGTGTTTGTGTGGTATGTTGATGCATTCACTCTTCACATTGTTGTCTAGGTGCATTTTTTTATTGAGTTCGGTACTTCGGTTTAACCAGGTGGC CATCTGACAATTGAAGAGATCTGACTTAATTTTAATAGTAAGAATTTAGATGTTTGATATTCCAGTTTTGCTTACTGTCTTTTATCCAGGTTGATTGATT GCAAGCATTTCAAATCTGGTAATGGGAACTGTCCATTTGGGAATATTTGTTTCTACAAGCATACTGTGAAGCCTGGCTCATACACATGGATACATAACAG GCCACCACCTCAACGTAGACCTAACAATTATGATATGTATGACATGTTGGATATGCTCAGCGAAGTTAATTTATCAAGTGAGGAGCTTTATTCCATCATG AGGGGCTCTGGGCTTTATAATGATATGGATCCATTTGAGATGATGGCTATATCAGATGCAATGGCCAGTGGGGATGGTCCTTGTTTGGGTCCTTTTGATT CTGATGATGATGAAGTAAACATGGATTTTTCCAGGATGACTTCTTTGTCAGAGGCATTAGCTTCTGGTGTGGACGACATTGGCCCTGAAGATTTTGGAAA TGATGAAATGGCTCATATGGAGGCAGCATTGTTATCAATGATGATGCATTCTAATATTGAAGAAGAGGAGGAAGAAGAATACAGTGATGAATACTATTAA ATTTACTTAGTTCTTATGAAACCCATCTTGAGTCATTTTCTGAGGTAGGTTCCTTTGGGATTTGGATTCAATGACTTTCAGAAATATTGGGCAGTTGAGA TTCTTATTCTAGTTTGTGGTATGTTAATTCTCATGTCAATAGTTGGTATTGTGATTATTTGCCATTTTTGTATATTTAATCATATCATACTATTGAAGGA GTTTTGGTTTGGGGTTTGTTTAGTCCACATATTGGTCCTTGAATTTTGATTGCCCTATTGAAAGGGTTACTATTTTGGCTTGAAGATGATAAAACAGTGC TGTGTCTTTCATATATAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63377; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9279
| Blastp | Putative RING-type E3 ubiquitin transferase C3H69 from Arabidopsis with 48.68% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase makorin from Arabidopsis with 47.22% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425357.1) |
| Pfam | RNA-binding, Nab2-type zinc finger (PF14608.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |